Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01022 ATGGTCTTTGGCAAACATCCAGGCGTCAAGAACCACCTCCGAATCTCCTCCTCCCTCCAAGATCTCTCCTCCTATCGCTACGACCTCGAACATGGCCCCACACCCAACAACTTCACTTCCAGTTTCTCCAAAACCAAACCGGTTCAACTCCCCAACCCGGTTCGCCGCAAACACCTCTTCCTCTTCCCGAtcctcatcctcctcctcttcctcctcctcttTTTCCTCTACACCCTCTACTCCCACCACTCCTCCCCCAAATACTACGTCGTTCTCGACTGCGGCAGCACCGGGACACGTGTCTACGTCTACAGAGCCCAAATCCAACACAATGACAAAAAAACCACCCTCCCTATCTCCATCCAATCACTAAAAGACGGCTTGCGCAAGAACCCTTCAAGCGGCCGCGCCTACGACCGCATGGAAACCGAACCGGGTCTCGACAAACTGCTCCACAACCGAACCGGTTTAAAAACCGCCCTCGTACCGCTTCTCAAATGGGCTCAGAAGCAGATTCCAGAAACTTCCCATAAAACCACTTCGCTTTTCCTCTACGCCACCGCAGGGGTTCGGAGACTCCCCTTCGACGATTCGAAATGGCTGCTCGACAACGCGTGGAGCTTTTTGAAGAGCTCTTCGCCGTTCGTGTGCAAGAGGGATTGGGTCAAGATCATTTCGGGGACCGAAGAGGCTTACTTTGGATGGATTGCGCTTAATTACGATTCCGGGATTCTTGGGGTTAAGCCGAGGAGAGAAACATACGGTGCTCTTGATTTGGGAGGGTCTTCATTGCAGGTCACGTTTGAGGGGAATAGCAATAAAGAGCCGCAACATTTGTTCAATAGTGAGACTAGTTTGTATGTTAGGATTGGGTCTGTGAACCATCATTTGACGGCTTATTCACTCGCGGGGTATGGCCTCAATGAGGCATTTGATAAGTCTGTTGCTCATGTTTTTAAGGAGTTTGGGTATGGTATGGAGGATGTTGTTAAGGGGAATTTGGAGGTTAAGCATCCCTGCTTGCAAATCGGGTACAAGGAGAGGTATTCGTGCTCACATTGTTCTTCTGCTGTGAAGAAAGGAGGGGAGAGTCTGATGGTTGAGGGAAATGGGAATGTGGTGGGGAAGAAGGAGGGAGGATCAAGGACTGTGGTGACGCTTGTTGGCGCCCCAAATTGGTTGAAGTGTAGCACGCTGGCGAAGGTTGCCGTGAATTTGTCTGAGTGGAGTGATGTTAGGCCTGGGCTGGATTGTGAGGTTCACCCGTGTGCCCTTCGTGGTAATTTGCCCCAGCCAATGGGGCACTTTTATGTGATTTCTGGGTTCTTTGTGGTGTATCGGTTTTTCAATTTGACTGCTGAGGCCACGCTTGAGGATGTGTTGGAGAAGGGGAGGGAGTTCTGTGATAAGAGATGGGATGTTGCGAGGAAGAGTGTTGCCCCTCAGCCGTTTATTGAGCAGTATTGCTTCAGAGCACCATATATTGCATCGTTGCTGAGGGAGGGTTTGCACATTACTGATAAGCATATAACTGTTGGCTCTGGAAGCATAACTTGGACTCTTGGGGTGGCCTTGTTGGAAGCTGGGAAGGCGTATTCGGTTAGGTTTGGACTCCGTGGTTTTTACTTGCTTCAGATGAAGATGAATCCGCTTATTCTTATTCCCATTTTGATACTTTCTTTCATTCTTCTGCTTTGTGCTTTGTCGTGGGTTGTCAATTGGATGCCAAGATTTTTCCGGAGACAGTATCTTCCATTTTTCAGGCATAACAGTGCGTCCAGTGCATCTGGTATTAATATCCCATCTCCTTTCCGGTTTCAGCGGTGGAGTCCTATGAATTCTGGAGATGGAAGAACAAAGACCCCACTCAGCCCAACAATTGCAGGTTCACAGGATAGACCGTTTAGCCTGGGGCATGGCCTTAGTGATAACAGTGGAAACATCCAGCTGATGGAATCTTCCTTTCACCCATCAGCTAGTAGTGTCTCACATAGTTATTCCTCGAACAATTTAGGGCAGATGCAGTTCGACAGCAGTAGTATAGGGGCATTCTGGTCACCTCACAGAAGTCAGATGCATCTGCAGAGTAGAAGATCTCAATCTCGAGAAGACCTGAATTCTTCATTGGCTGAGACACACATGGTGAAGGCTTAG 2154 0.4842 MVFGKHPGVKNHLRISSSLQDLSSYRYDLEHGPTPNNFTSSFSKTKPVQLPNPVRRKHLFLFPILILLLFLLLFFLYTLYSHHSSPKYYVVLDCGSTGTRVYVYRAQIQHNDKKTTLPISIQSLKDGLRKNPSSGRAYDRMETEPGLDKLLHNRTGLKTALVPLLKWAQKQIPETSHKTTSLFLYATAGVRRLPFDDSKWLLDNAWSFLKSSSPFVCKRDWVKIISGTEEAYFGWIALNYDSGILGVKPRRETYGALDLGGSSLQVTFEGNSNKEPQHLFNSETSLYVRIGSVNHHLTAYSLAGYGLNEAFDKSVAHVFKEFGYGMEDVVKGNLEVKHPCLQIGYKERYSCSHCSSAVKKGGESLMVEGNGNVVGKKEGGSRTVVTLVGAPNWLKCSTLAKVAVNLSEWSDVRPGLDCEVHPCALRGNLPQPMGHFYVISGFFVVYRFFNLTAEATLEDVLEKGREFCDKRWDVARKSVAPQPFIEQYCFRAPYIASLLREGLHITDKHITVGSGSITWTLGVALLEAGKAYSVRFGLRGFYLLQMKMNPLILIPILILSFILLLCALSWVVNWMPRFFRRQYLPFFRHNSASSASGINIPSPFRFQRWSPMNSGDGRTKTPLSPTIAGSQDRPFSLGHGLSDNSGNIQLMESSFHPSASSVSHSYSSNNLGQMQFDSSSIGAFWSPHRSQMHLQSRRSQSREDLNSSLAETHMVKA 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01022 717 MobiDBLite consensus disorder prediction 692 717 - -
Gma16g01022 717 Pfam GDA1/CD39 (nucleoside phosphatase) family 83 526 IPR000407 GO:0016787
Gma16g01022 717 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 27 689 IPR000407 GO:0016787
Gma16g01022 717 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 27 689 - -
Gma16g01022 717 Gene3D - 77 226 - -
Gma16g01022 717 Gene3D Exopolyphosphatase. Domain 2 227 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01022 Gma-Chr16 25818749 25825997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01022 8 716 Nodulin-like Gene Family AT4G19180 59.753 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01022 - - gmx:100809597 1381.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01587 01 51457120 51460553 Gma16g01022 16 25818749 25825997 PCT
Gma11g00821 11 6893923 6896404 Gma16g01022 16 25818749 25825997 PCT
Gma16g01022 16 25818749 25825997 Gma01g01587 01 51457120 51460553 PCT
Gma16g01022 16 25818749 25825997 Gma11g00821 11 6893923 6896404 PCT