Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01021 ATGGCAGCAGTGTCAGGAGGAGGAGGGACTGAGATATGGAAGGCCCACACGGCAATGGCGATGGTGCAGTTATTCAACGGAGGCTATCACGTCATCACCAAAGTTGCACTCAACGTCGGGGTCAACCAAATCGTCTTCTGCGTCTTTCGCGATCTCATTGCCCTCGCCATTCTCGCCCCTCTCGCTTACATCCGCGAAAAGCGTACACGGCCACCCTTAACAAAGCACCTTCTGTTGTCATTCTTCTTTCTTGGATTGACTGGGATATTTGGCAACCACCTTTTGTTTCTTATTGGCTTAAGCTATACTAATCCAACTTATGCTGCTGCAATTCAGCCAGCCACTCCGGTCTTTACTTTTCTGTTGGCTGTAATGATGGGTACAGAAAGAGTGAACTTGCTTAGATATGAAGGTCTGGCCAAGGTTGGAGGAACTTTTTCCTGTGTTTTAGGAGCTGTACTGATGGTTTTATATCGTGGTCCGGCATTGATAGGATATTCAGAAACAGACTTTGTATCACACAGTGAAATAAGTGCGAAAGGTCAACCGGAGCCTTCTGGATGGTTAATTAGTGGTTTACAGGATCTTGGATTAGACCATTTTCATCTTGGGGTTTTGTGCTTCATAGGGAACTGCATGTGCATGGCTGCTTTTCTATCCATTCAGGCTCCATTATTAAAAAAGTATCCTGCAAACCTATCTGTAACAGCATATTCATACTTCTTTGGAGCTTTATTGATGGTAACTACATCATTCTTTGCAACTAATGAGTCAACTGACTGGAGATTGACACAATCTGAAACAATAGCCGTTATTTATGCTGGATTTATTGCATCTGCCCTTAATTATGGACTCATTACATGGTGCAACAAGATCTTGGGGCCAGCCATGGTTGCTCTTTATAATCCACTTCAACCTGGAGCTTCTGCTCTCCTATCCAGAATTTTTCTTGGAAGTCCAATTTACATGGGAAGCATCTTAGGAGGATCTTTGATCATTATTGGTTTGTATGCGGTTACTTGGGCGTCTTATAGAGAAAGACACGCAGCTGCTGGAGTTGTTTCGCATGGCTCTCGGGTCTCTGAATCACTTGTCCATGACAAGAGTTCTTTTAGGGTTAACATTTTCTCAGGACCCCCCAGCCTGTCCCCAAAGCCTTCGGATTAA 1167 0.443 MAAVSGGGGTEIWKAHTAMAMVQLFNGGYHVITKVALNVGVNQIVFCVFRDLIALAILAPLAYIREKRTRPPLTKHLLLSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLLAVMMGTERVNLLRYEGLAKVGGTFSCVLGAVLMVLYRGPALIGYSETDFVSHSEISAKGQPEPSGWLISGLQDLGLDHFHLGVLCFIGNCMCMAAFLSIQAPLLKKYPANLSVTAYSYFFGALLMVTTSFFATNESTDWRLTQSETIAVIYAGFIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSILGGSLIIIGLYAVTWASYRERHAAAGVVSHGSRVSESLVHDKSSFRVNIFSGPPSLSPKPSD 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01021 388 PANTHER WAT1-RELATED PROTEIN 13 374 - -
Gma16g01021 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 140 - -
Gma16g01021 388 Pfam EamA-like transporter family 20 139 IPR000620 GO:0016020|GO:0016021
Gma16g01021 388 Pfam EamA-like transporter family 203 340 IPR000620 GO:0016020|GO:0016021
Gma16g01021 388 PANTHER WAT1-RELATED PROTEIN 13 374 IPR030184 GO:0016021|GO:0022857
Gma16g01021 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01021 Gma-Chr16 25768418 25775738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01021 11 274 Nodulin-like Gene Family AT3G45870 72.348 1.40e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01021 - - gmx:100809051 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00822 11 6898024 6902962 Gma16g01021 16 25768418 25775738 PCT
Gma16g01021 16 25768418 25775738 Gma11g00822 11 6898024 6902962 PCT