Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00994 ATGGATTTTCTGCTTTGGTTTCTTGGAGTAAAACTTGACTGCGTGTTTGGTGAGGACTTGGATTTGGATGAAATAATATTTCTATTAGAGTTTTTCAATGGCCTTGAGCACCCCATTGTTTTTTCTCTGTTGCCTGGAGTCAGTGCAACACCACTAATGGCTAACTCGATTAGTAGTCTAGTTAACACATACCGAGTAACAGGAGATGATTGGGATGAATGGTCAGCAATCTTAGCTCACTTTAATGTAGCAAGTTTACTTACTGACCTCACGCTTCTCCACATCAACACTAACCGCTTCTACAACACTGTGCAACACAAGTTCGACAAGCTGAAACTCCCCTTTGAGTTAGATCTCAGCAACAACTGCTTCGTCAGGAAGTTCCCCGATGTGGTGTTGTGTTTGTCGCAACTCAAGTTTCTAGATATGAGATTCATTAAATTCAAAGGTACGGTTCTGAAGGAGCTCTTCGACAAGGACCTGGACGCGATTTTCATCAATGACAACCGCTTCATCTTCAACTTATTGGAAAATTTGAAAACTCGCTGGTGTCGGTGA 558 0.4194 MDFLLWFLGVKLDCVFGEDLDLDEIIFLLEFFNGLEHPIVFSLLPGVSATPLMANSISSLVNTYRVTGDDWDEWSAILAHFNVASLLTDLTLLHINTNRFYNTVQHKFDKLKLPFELDLSNNCFVRKFPDVVLCLSQLKFLDMRFIKFKGTVLKELFDKDLDAIFINDNRFIFNLLENLKTRWCR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00994 185 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 10 84 IPR002241 GO:0004553|GO:0005975
Gma16g00994 185 Gene3D Aldolase class I 9 105 IPR013785 -
Gma16g00994 185 SUPERFAMILY L domain-like 82 177 - -
Gma16g00994 185 PANTHER ALPHA-GALACTOSIDASE 10 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00994 Gma-Chr16 23955738 23959793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00994 86 179 Leucine-rich Repeat extension Gene Families AT4G13340 68.085 7.10e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00994 - - gmx:106799218 145.206