Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00992 ATGGCTGGCCATATGGGTAGAGATGTCATAGAGGAGCAGGTATGGAGGAAGGGACCTTGGACTGCTGAAGAGGACAGGTTGCTTGTTGAGTATGTCAGGTTGCATGGTGAAGGCAGATGGAACTCTGTTGCTAGGCTTGCAAATTGGAATTCCTTTCCTTTCTCCATACTCCAGCAAAGTTTGAAGGTGCAGCAACGGAAGGTGGTAGGGGACCAAGTATATGGGATACCTTCACCCATAAATATCCAGATAAGACAAAAGACAAAAGCAATGGAGATGTGGCCATTGATGCTTAACATCGTTACAAGAGAGGATTTCGTTTCTGGTTCCTCTTCCCCTCCGCCACCGTCCTCTAAACCCTCGCGCTGTCCAAGCCAAGCGCCACTTCGTCCAAGGCGCGCAGCTCCTCGCCCAAGCCTGAAGATCCAAAAGCGCTTCCGCCGCAACCTCCCTCGCCAAACAGGCCCTAGCCGAGGTCGAGAAGGCCCTCGCGCTCGACCCCAAGGACGCTgccattaa 519 0.5222 MAGHMGRDVIEEQVWRKGPWTAEEDRLLVEYVRLHGEGRWNSVARLANWNSFPFSILQQSLKVQQRKVVGDQVYGIPSPINIQIRQKTKAMEMWPLMLNIVTREDFVSGSSSPPPPSSKPSRCPSQAPLRPRRAAPRPSLKIQKRFRRNLPRQTGPSRGREGPRARPQGRCH 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00992 172 Pfam Myb-like DNA-binding domain 17 48 IPR001005 -
Gma16g00992 172 Gene3D - 11 93 - -
Gma16g00992 172 SMART sant 16 55 IPR001005 -
Gma16g00992 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 46 IPR017930 -
Gma16g00992 172 CDD SANT 19 45 IPR001005 -
Gma16g00992 172 MobiDBLite consensus disorder prediction 106 172 - -
Gma16g00992 172 SUPERFAMILY Homeodomain-like 16 74 IPR009057 -
Gma16g00992 172 PANTHER MYB TRANSCRIPTION FACTOR 1 48 - -
Gma16g00992 172 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 48 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gma16g00992 172 ProSiteProfiles Myb-like domain profile. 16 45 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00992 Gma-Chr16 23745287 23748923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00992 12 47 MYB Transcription Factor Family AT4G13480 86.111 4.78e-17 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma16g00992 Myb_DNA-binding 1.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00992 K09422 - gsj:114410507 100.523