Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00984 ATGGAGATCACTAGAATAGGCCAATGGTTAAGTCTTCTGATATGTGTACTACTATTACTGCAGACAGAAGGGGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGGGCTGTTTGTTTGGATGGGAGTCCTCCAGCTTACCACTTCCACAAGGGATCTGGAGCAGGGATTAACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTTACTACTTGCCTTTCCCGTAGGGACACTCGATTAGGTTCATCTAAGAAAATGGATACATCACTTTCCTTTTCTGGGTTTTTCAGTAACAGTAAAAAGTTCAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCGAAAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGTGGTCGTTGAGGATTTATTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCCGGATGTTCAGCTGGAGGATTGGCTTCTATTCTAAATTGCGATCGATTCAAATCACTACTACCTGCAACAACTAAAGTGAAATGCCTTGCAGATGCTGGTTTTTTTATCAATGTAAAGGATGTCTCTGGAGCACAGCGCATTGAAGAGTTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCAAAGAATTTGCCTACATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCTCAAAATGTCGTGTCCCAAATCAGTACCCCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATCAAAAACATTTTGGCACCAGGTGCTGCTGATCCCCGTGGCCAATGGCGTGAATGCAAGCTTGATATCAAAAACTGCTCACCTAATCAACTCAGTGTAATGCAAGGATTCAGGACAGATTTCTTAAGGGCATTTAGTGTGGTTGGCAACGCCGCATCTAAAGGGCATTTTATAGATGGTTGCTATGCACACTGCCAAACTGGAATACAAGAGACATGGCTGAGAAATGACTCCCCAGTGGTGGCCAAGACATCAATTGCAAAGGCAGTGGGTGATTGGTTTTATGATCGAAGGCCCTTCCGTGAGATAGATTGTGCCTACCCTTGCAACCCTACTTGCCATAATCGTATTTTTGATCAGAATGAGCGTCCAGACGTATAG 1200 0.4325 MEITRIGQWLSLLICVLLLLQTEGVPVGITFVENAVAKGAVCLDGSPPAYHFHKGSGAGINNWIVHFEGGGWCNNVTTCLSRRDTRLGSSKKMDTSLSFSGFFSNSKKFNPDFYDWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGARVFAVVVEDLLAKGMKNAQNAIISGCSAGGLASILNCDRFKSLLPATTKVKCLADAGFFINVKDVSGAQRIEEFYSQVVQTHGSAKNLPTSCTSRLRPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGAADPRGQWRECKLDIKNCSPNQLSVMQGFRTDFLRAFSVVGNAASKGHFIDGCYAHCQTGIQETWLRNDSPVVAKTSIAKAVGDWFYDRRPFREIDCAYPCNPTCHNRIFDQNERPDV 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00984 399 PANTHER PECTIN ACETYLESTERASE 3 394 - -
Gma16g00984 399 PANTHER NOTUM-RELATED 3 394 IPR004963 GO:0016787
Gma16g00984 399 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00984 Gma-Chr16 23201872 23208259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00984 5 399 Carbohydrate Esterase AT4G19420 59.767 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00984 K19882 - gmx:100781246 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00984 16 23201872 23208259 Gma01g01559 01 51077384 51085267 PCT