Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00980 ATGCGGCCACGCAGGGAAACAGAGAAGCGCAGATTCGATTTCGACTCAGCCAACACCAACAACTCAGCCTCCTCCTCCCCCAAATCACCGCGGCGAAGGCCGAAGCTCTTGGCGGTGCTGATGGCGGGGCAGTCGCGGAAATGGATGATCCTGGTGGCCACGATTTGGATTCAGGCCTTCACGGGGACCAATTTCGATTTCTCCCAGTACTCGTCGTCGCTCAAATTCGCGCTTAACGTGTCGCAGGTGCAGCTGAACTATCTCGCCACGGCGAACGACATGGGGAAGGTTTTCGGGTGGTCCTCGGGGATTGCCCTAATGCACCTTCCGGTTTCTGTTGTTATGTTTGTTGCGGCTTTCATGGGGTTCTTCGGGTACGGCCTCCAGTGGCTCGTCATCACCGGCGTCGTCAATTTGCCTTATTTTCTGGTCTTTCTTCTGTGCCTTTTAGGGGGATGTAGCATCTGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATTAGGAATTTTCCGGTTAACCGAGCCCTTGCATTATCGCTCACTGTGAGTTTCAATGGCATTAGTGCAGCACTCTACACCCTTGTTGCCAATTCAATTGATCCATCATCGGATGCACTGTATCTGCTATTGAATGCTCTTGTTCCCCTTCTCATTTGCATTGCAGTACTTGTCCCTATTCTTAACCAACCAGCTTTAGACCCTCTCCCTCCTGATGCAGTAAACCGGGACTCAGTGATATTTCTAATATTGAACTTTATAGCCCTTTTAACTGGTCTTTATCTTCTCCTGTTTGGCTCATCTGCTTCTGGTGTGACTTCTGCTCGGTTCTATTTTGGTGGAGCTATTTTCCTCCTCATCTTCCCATTATGTATTCCTGGCATTGTATATGCTCGGGCTTGGTTTCAGCATACCATCCATTCCAGCTTTCAGATGGAAAGCTCTAGCTTCATTCTTGTTCATGATGATGATCTTGAGATGCATAAAGAGCTCCATAGCCGTCAAAATAGTATTGTTAGCAATGGAGATACTTACAGCCTGCTAAGCAACAATGGATACATGTTTGGGAGCCAAAGGGAAAAAGATAGTGATCCGTGTTGTGAGACGATGATTGGGCAGGATCAGTTAGCAGTGCTAGGAGAAGAGCACTCAGTTGCAGTAGTTGTCCGCAGATTGGATTTTTGGTTATACTATGCTACATACTTCTGTGGAGGTACACTTGGTCTAGTCTATAGCAATAATCTGGGACAGATTGCACAATCTGTGGGCCAGAGTTCAAATACTTCTACACTTGTCATGCTCTATGCATCCTTTTCTTTTTTTGGTCGCTTGCTTTCAGCTGGACCAGACTACATTCGGAATAAGATCTACTTTGCAAGGACTGGTTGGCTATCAATTGCACTTATACCAACCCCAGTTGCGTTCTTCCTCCTTGCTGCATCAGACAGTCTTCTGGCACTTCAGACAGGCACCGCACTGATTGGATTGAGCTCTGGTTTTATATTTGCAGCTGCTGTGTCAGTTACATCTGAGTTGTTTGGACCTAACAGTGTGGGCGTCAATCACAACATTCTCATAACAAATATCCCTATTGGATCTCTTCTCTATGGCTTTCTTGCTGCACTAGTTTATGATGCTAATGCACCCTCAATGCCAGGAAACTTGATAACGTCTGACTCAGTAGTGTGCATGGGAAGGCAGTGTTACTTCTGGACATTTGTCTGGTGGGGATGCATATCTGTCCTGGGACTAGCTTCAAGCATGCTATTGTTCTTAAGAACCAAACATGCATATGATCATTTTGAGAAGAACCGTATTTCAACTCAATCAATTGTGTCTTAA 1839 0.4611 MRPRRETEKRRFDFDSANTNNSASSSPKSPRRRPKLLAVLMAGQSRKWMILVATIWIQAFTGTNFDFSQYSSSLKFALNVSQVQLNYLATANDMGKVFGWSSGIALMHLPVSVVMFVAAFMGFFGYGLQWLVITGVVNLPYFLVFLLCLLGGCSICWFNTVCFVLCIRNFPVNRALALSLTVSFNGISAALYTLVANSIDPSSDALYLLLNALVPLLICIAVLVPILNQPALDPLPPDAVNRDSVIFLILNFIALLTGLYLLLFGSSASGVTSARFYFGGAIFLLIFPLCIPGIVYARAWFQHTIHSSFQMESSSFILVHDDDLEMHKELHSRQNSIVSNGDTYSLLSNNGYMFGSQREKDSDPCCETMIGQDQLAVLGEEHSVAVVVRRLDFWLYYATYFCGGTLGLVYSNNLGQIAQSVGQSSNTSTLVMLYASFSFFGRLLSAGPDYIRNKIYFARTGWLSIALIPTPVAFFLLAASDSLLALQTGTALIGLSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDANAPSMPGNLITSDSVVCMGRQCYFWTFVWWGCISVLGLASSMLLFLRTKHAYDHFEKNRISTQSIVS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00980 612 SUPERFAMILY MFS general substrate transporter 212 595 IPR036259 -
Gma16g00980 612 SUPERFAMILY MFS general substrate transporter 32 227 IPR036259 -
Gma16g00980 612 MobiDBLite consensus disorder prediction 1 31 - -
Gma16g00980 612 MobiDBLite consensus disorder prediction 1 15 - -
Gma16g00980 612 PANTHER NODULIN-LIKE/MFS TRANSPORTER 29 612 - -
Gma16g00980 612 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 612 - -
Gma16g00980 612 Gene3D MFS general substrate transporter like domains 4 225 IPR036259 -
Gma16g00980 612 Pfam Nodulin-like 47 292 IPR010658 -
Gma16g00980 612 Gene3D MFS general substrate transporter like domains 387 601 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00980 Gma-Chr16 23112089 23117128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00980 1 609 Nodulin-like Gene Family AT1G31470 56.564 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00980 - - gmx:100803546 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01556 01 51046481 51051681 Gma16g00980 16 23112089 23117128 PCT
Gma09g02011 09 45693673 45698336 Gma16g00980 16 23112089 23117128 PCT
Gma16g00980 16 23112089 23117128 Gma01g01556 01 51046481 51051681 PCT
Gma16g00980 16 23112089 23117128 Gma09g02011 09 45693673 45698336 PCT