Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00962 ATGGAGAAAACAAGGTCCTCAGACCAAGTTGTTGTCTTCCTCGACCAGCATAACCCTAAACCACCCTCCATGGAATCCGAAAACCATCAGGACAAACCCAAACATCCCTTAAAAGTCAGAGCTCTTAACCGTCTCAGCTTCTCAAAACCCAAATCCCGAATCCTAGAATACAACTATAATGTCCCCCGCAACAAAGTTGCTGAAGAGAGTGACATTATTCAACCCACCTATAAGTTCTCTTCCAACGATGACGATGACGATGACGACGATAACGATTTGGATTTGGAATGGGATGAGGATGAGACCGAGGAGGATGGCTCGGAGCATGGCCCAAAGTTGCACCAAAAGAGGAAGTTCAAAATCAAGTGGAGGCTCATGATGGAGTGGATTTTGTTCCTCAACATATTGGCATGCTTGGTGTGTTCTTTGACCATATCTTCCATAACGAACATGCACCTTTTGGGATTGGAGATTTGGAGGTGGTGTGTGATGGCAATGGTCACGTTCAGTGGCCGTTTGGTTTCTGGGTGGGTGGTAGGTCTAACGGTGTTCATCCTGGAGCGAAACTTCATGCTCCGAGAGAAGGTGCTGTACTTCATCTACGGACTCCGAAACAGCATAAGAAACTGCATGTGGCTAGGCCTGGTGCTACTCTCCTACTGGAGCATGGTGTTCAACGACGTCCAAAAGAAGAACCACAAGTTCCTCAACAAGGTCTTCCAAGCCCTAGTAGCAGTGTTAGTGGGCGCTACCATCTGGCTCGTGAAGATCGTGCTGGTGAAGATGCTCGCGTCCTCGTTCCACGTCACCACCTACTTCGACCGAATGAAGGAGAGCGTCTTCCATCACTACATTCTCGAGACCCTCTCGGGTCCTCCGATGGAAGACGCCGAGGAGGTGCTGCGGCAGCACCACCTCGCGGGATCGAAGTCGATGCCCGCGAGGTGGAATGCCAAGAACTTGTACAAGTCCAAGAGGTTCGGATCGAGGAAGATTGATATGGAGAAGCTGAGGAAGCTGAGCATGGAGAGCACCGCTACAGCGTGGAGCGTGAAGAGGCTTGTTAACTATGTTAGGTCTTCCGGCTTGTCCACTATTTCGAGGACTGTGGATGATTTTGGCAACGCGGAGTCTGAGATTAGTAGTGAGTGGGAGGCTAGGAACTGTGCTCAGAGGATTTTCAAGAACGTTGCCAAACCTGGTGCCAAGTATATTGAAGAGGAGGATCTCATGAGATTTTTGAAGAGGGTTGAGATACATACCATATTTCCACTCTTTGAAGGAGCACTTGAAACGGGACAGATCAGCAGGTCTTCATTTAGAAATTGGGTGATTCGAGCTTATTATGAACGAAAAGCTCTAGCACAATCACTGAATGATACCAAAACAGCAGTGCAACAGCTTCACAAAATAGCAAGCGCAGTTGTTAGTGTGATAATAATCATTGTGATGCTTTTGCTGATGGAGATGGCAACGATCAAGATAATATTATTCTGTATTACACAGTTTGTTTTGATAGGTGTTGCCTTCCAAGGTACTTGCAAGACTGTGTTGGAGGCCATCATCTTTGTCTTCGTCATGCACCCTTTTGATATTGGAGACCGCTGCGTTATTGATGGAGTTCATATGATTGTGGAAGAGATGAATATCTTGACAACAGTATTTCTTCGATATGACAATGAGAAAATATATTACCCTAATGCAGTTTTACTCTCTAAGCCTATAAGCAATTTCTATAGGAGCCCAGAGATGTGGGATTCAATTGATTTCACCATTGATGTTTCAACTTCTATGGAGACCATCCTTGCACTCAAGAAATCAATACAAATGTACATTGAGAGCAAGCCAAAGTATTGGAATCCAAAACACAGCATGATAGCAAAAGGAATTGAGAATATGGACAAGCTAAAGCTGTGCTTATCTGTGCAACATACCATCAACCATCAGAACTACGGTGAGCGAAACATTAGGATAACGGAACTTCTCTTGGAATTGAAGAGGATCTTTGAGATCCATGGTGTCAAGTACCATCTTCTTCCTCAGGAGATCCAGATTACCCATATGAATATTGAACATAGCAAAGTTCTGTTTCAATCATGA 2100 0.4514 MEKTRSSDQVVVFLDQHNPKPPSMESENHQDKPKHPLKVRALNRLSFSKPKSRILEYNYNVPRNKVAEESDIIQPTYKFSSNDDDDDDDDNDLDLEWDEDETEEDGSEHGPKLHQKRKFKIKWRLMMEWILFLNILACLVCSLTISSITNMHLLGLEIWRWCVMAMVTFSGRLVSGWVVGLTVFILERNFMLREKVLYFIYGLRNSIRNCMWLGLVLLSYWSMVFNDVQKKNHKFLNKVFQALVAVLVGATIWLVKIVLVKMLASSFHVTTYFDRMKESVFHHYILETLSGPPMEDAEEVLRQHHLAGSKSMPARWNAKNLYKSKRFGSRKIDMEKLRKLSMESTATAWSVKRLVNYVRSSGLSTISRTVDDFGNAESEISSEWEARNCAQRIFKNVAKPGAKYIEEEDLMRFLKRVEIHTIFPLFEGALETGQISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKIASAVVSVIIIIVMLLLMEMATIKIILFCITQFVLIGVAFQGTCKTVLEAIIFVFVMHPFDIGDRCVIDGVHMIVEEMNILTTVFLRYDNEKIYYPNAVLLSKPISNFYRSPEMWDSIDFTIDVSTSMETILALKKSIQMYIESKPKYWNPKHSMIAKGIENMDKLKLCLSVQHTINHQNYGERNIRITELLLELKRIFEIHGVKYHLLPQEIQITHMNIEHSKVLFQS 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00962 699 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 4 697 IPR016688 -
Gma16g00962 699 MobiDBLite consensus disorder prediction 22 38 - -
Gma16g00962 699 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 4 697 - -
Gma16g00962 699 PIRSF Memb_At2g17000 3 698 IPR016688 -
Gma16g00962 699 SUPERFAMILY Sm-like ribonucleoproteins 520 578 IPR010920 -
Gma16g00962 699 MobiDBLite consensus disorder prediction 1 39 - -
Gma16g00962 699 Gene3D - 529 578 IPR023408 -
Gma16g00962 699 Pfam Mechanosensitive ion channel 470 675 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00962 Gma-Chr16 22679712 22687492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00962 20 689 Mechanosensitive Ion Channel Family AT5G12080 43.804 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00962 K22048 - gmx:100813521 1348.95