Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00956 ATGTTGCATAAGAAGAAGAATGGCAGCGAAAACGACAACAACAAGGAGAACGAAGACACCACCATCACCGATGTCTTGAAGGTCAAAGCGCACTACGACGGTTGCGCTCCCCTTTGTGGCATAGAAAGCTTTTATTTTGATGATAAGTTTAGATATCCTGAGAATTCTGCTCCTGGTCAACTCCCAAGAACAATGGATGTAATTGCAGATGACGACCTTGTTGATTCTTGCAAGCCTGGAGATCGAGTGGCAATTGTGGGGATATATAAGGCTCTTGCAAGGAAAAGGCAGACTGTTCTCATAGCCAACAATGTTTCTCTTCTCAACAAAGAGGCTAATGCACCAATATACAGTGCTGAGGATGTCAAAAACATTAAAGAGATAACTGCAAGAGATGATGCATTTGATCTGCTAACTAATTCACTTGCACCTTCTATATATGGGAATTCTTGGATAAAGATAGCAGTGGTTTTGTTGATGCTTAATGGGGTGGAGAAGAATTTAAAGAATGGCATTCACTTGCGAGGGTTAGAGTTTTCTCTTGATCTCCTTTCTGTGAGGCAGCACTTGATGGGAGCTCAAGATATGGAAGAGAAAATGAAGCTGATATGGACTCATGTGTCTTTGTCAAATATAACAGAATGTTACAATTAA 654 0.4067 MLHKKKNGSENDNNKENEDTTITDVLKVKAHYDGCAPLCGIESFYFDDKFRYPENSAPGQLPRTMDVIADDDLVDSCKPGDRVAIVGIYKALARKRQTVLIANNVSLLNKEANAPIYSAEDVKNIKEITARDDAFDLLTNSLAPSIYGNSWIKIAVVLLMLNGVEKNLKNGIHLRGLEFSLDLLSVRQHLMGAQDMEEKMKLIWTHVSLSNITECYN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00956 217 Gene3D - 116 177 IPR027417 -
Gma16g00956 217 ProSiteProfiles MCM family domain profile. 134 176 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma16g00956 217 Pfam MCM OB domain 53 91 IPR033762 -
Gma16g00956 217 PANTHER DNA HELICASE 52 176 - -
Gma16g00956 217 SMART mcm 4 217 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma16g00956 217 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 52 176 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma16g00956 217 Pfam MCM P-loop domain 121 176 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma16g00956 217 Gene3D - 50 112 IPR012340 -
Gma16g00956 217 SUPERFAMILY Nucleic acid-binding proteins 53 97 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00956 Gma-Chr16 22570916 22572821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00956 53 176 Core DNA Replication Machinery Family AT5G46280 71.970 1.37e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00956 K02541 - gmx:100811545 216.468