Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00931 ATGGATGGGGTCGCACGTGCGGTGGAGCAGGCTCAGTCATCATCGGGCTTGGCCTCGGGGTGGCGTCCCCGCGGCTCCGTGTTCTCTCCTTGTAAGCCTAAGGGCGAAGAAGAAGCTTCTGCTGCTGCTGGGAAGAAGCCGCAGCAACCGTTGCACGTGGTTGTGAGGAAACCTTTGGTGGCTAGATTGACCAAGGAAATAGTTGAAACATACCAAATATGCAATCCACAGTTTAAATATTCTGAAGATCTAAATCCAAAAAGATTTTTGACCAGCCCGTCTGTTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCGGATCTGATTTTGACAGTGAATTTTGTCTTGATCCATTTAGAGAAAAATAAAAGATATATTGTCAAAGATCTCCTTGGCCACGGGACATTTGGACAAGTGGCTAAATGCTGGGATTCAGATACCAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCGCTGGTTGAAGTAACTATTTTAACAACGTTAAATAAGAAGTATGATCCTGAGGATAAGCATCACATTGTTCGTATATATGATTATTTTGTATATCAACGACATTTGTGCATTTGCTTTGAATTGCTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCACTTGGTATTGTTCAGCTATTCTCTAAGCAGATTTTATATGGACTGGCTCTACTAAAAGAGGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACGAGCACTGTGAAGCCAGCAGAAATAAAAATCATTGACTTTGGATCAGCATGCATGGAAAACCGCACCGTTTACTCTTATATTCAGAGTCGATACTATAGGTCACCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCGGAATTGTTTCTTGGATTACCATTATTCCCCGGGGCTTCAGAATTTGATCTTTTGAAAAGGATGATTGAAATACTTGGTGGACAACCACCTGATTATGTACTAAGGGATGCCAAAAACACAAGTAAGTTCTTCAAGTGTATTGGGAGTCTCCAGAACATTGAGAGCAGTGAGAGTTCTAAAAATGGAAGAAGTGTTTATCAAACATTGACAGTGGAAGAATATGAAGCTAGAGAATTGAAGAAGCCATCAATTGGAAAAGAGTATTTTAATCAGTTGAACCTTGAAGCAATTGTTACAAATTATCCCTACAGAAAAAACCTACCTAAAGAAGATATTCTCAAAGAAAGTCAAATACGACTGGCTCTTATAGATTTTCTGAAAGGGCTTGTTGAATTTGATCCTGCAAAACGCTGGTCACCCTTTCAGGCTTCAAAACACCCTTTTGTAACTGGGGAACCTTTTACACACCCTTACAAGCCTCCTCCTGAGACTCCTCATATGCCAGTAGTTCAAAATATCAAGGTGGATAATCATCCAGGAGGAGGACACTGGTTTGCCGCTGGTCTATCACCTAATGTTTCAGGCAAAAGCAGAGCTTCCCTTTATAGCAGTCCACATTTTCAGATGGTTCAACATCCGCCTGCCAATAGTTATGGCAGTGTAGGAAGTCATGGGAGCTATAATGATAGTGTTGGGCTTGGAAGCAGCTATGGAAGTTACGGAGAGAGCAGTAACATGTTTGCTTACTATTCACCTATTGGTCCATCTGGTATGAACATGCACAATCAGGGAAGTATGTCAATGCTTGGGAATAGTCCGGATGCAAGGAGGAGAGTTAAGTACCAACCTGGGAATGGGCTGGGGATAAGTCCGTCAGCTGGAAATTTTGCTCCCCTGCCCCTTGGTGCCAGCCCATCTCAATTTACTCCACCAAGTTCCTATAGTCAGGTTTCAGTCAGTTCTCCAGGACACTATGGACCTACATCTCCTGCAAGAGGAACTTCTCACGGATCACCTTTAGGCAAGACAGCTGCAGTTAGCCAGTTTAATAGAAGAAAAAATTGGGGACATTCTGGAAGTCCTCAAACTCAAGAAACATTTTCTTCACATTGGCCAGGTCAATATCCTGACAGCACAAGCCATACTGAGGGAACATCACAAGCTCTTGGCAGTTCACCATCATACCTACAGTCAAATAGTAATCCTGGAAACTGGAAGCAGCGAGGAAGTGGAGGGTTATCTGCTAATCAGAACATTTCATCCTTAATGAAGCCCAGTGCTAGTATGAACCCACAATCAACAGAAGTGGTTCATGACAATGCGGAGACAGGCATTTCTTTGCCTGATCCTGGTGATTGGGACCCTAATTATAG 2333 0.4222 MDGVARAVEQAQSSSGLASGWRPRGSVFSPCKPKGEEEASAAAGKKPQQPLHVVVRKPLVARLTKEIVETYQICNPQFKYSEDLNPKRFLTSPSVGVLNDGYDNVNSDLILTVNFVLIHLEKNKRYIVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLGIVQLFSKQILYGLALLKEAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLKRMIEILGGQPPDYVLRDAKNTSKFFKCIGSLQNIESSESSKNGRSVYQTLTVEEYEARELKKPSIGKEYFNQLNLEAIVTNYPYRKNLPKEDILKESQIRLALIDFLKGLVEFDPAKRWSPFQASKHPFVTGEPFTHPYKPPPETPHMPVVQNIKVDNHPGGGHWFAAGLSPNVSGKSRASLYSSPHFQMVQHPPANSYGSVGSHGSYNDSVGLGSSYGSYGESSNMFAYYSPIGPSGMNMHNQGSMSMLGNSPDARRRVKYQPGNGLGISPSAGNFAPLPLGASPSQFTPPSSYSQVSVSSPGHYGPTSPARGTSHGSPLGKTAAVSQFNRRKNWGHSGSPQTQETFSSHWPGQYPDSTSHTEGTSQALGSSPSYLQSNSNPGNWKQRGSGGLSANQNISSLMKPSASMNPQSTEVVHDNAETGISLPDPGDWDPNY 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00931 777 MobiDBLite consensus disorder prediction 1 47 - -
Gma16g00931 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Gma16g00931 777 SMART serkin_6 126 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00931 777 MobiDBLite consensus disorder prediction 626 760 - -
Gma16g00931 777 PANTHER DUAL SPECIFICITY PROTEIN KINASE 43 713 - -
Gma16g00931 777 ProSiteProfiles Protein kinase domain profile. 126 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00931 777 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Gma16g00931 777 MobiDBLite consensus disorder prediction 581 777 - -
Gma16g00931 777 Pfam Protein kinase domain 127 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00931 777 Gene3D Transferase(Phosphotransferase) domain 1 207 470 - -
Gma16g00931 777 SUPERFAMILY Protein kinase-like (PK-like) 120 492 IPR011009 -
Gma16g00931 777 PANTHER BNAC04G29850D PROTEIN 43 713 - -
Gma16g00931 777 CDD PKc_YAK1 126 469 - -
Gma16g00931 777 Gene3D Phosphorylase Kinase; domain 1 91 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00931 Gma-Chr16 21783575 21818853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00931 125 355 MAP Kinase Gene Family AT3G18040 33.740 1.51e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Gma16g00931 Pkinase 9.9e-51 CL0016