Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00917 ATGGATTCTGTTCTCCCCGATACTTCCACTAATGCCATTGCCTCTTCTACACCCACTTCACACCCTCATTCCCAACCCTCACTCCCACAAACCCTCTTAGTCCCCAAACCCGAACCCTTCTGGGATACCCACATCGAAACCTCCGACGAACTCGACCTCTACTCCGAGTTCAATCGCGTCACTGAGCTCTTTCACTTCGCCTTCGGAGCCACCAACGTTGTCGACCCTTTCGGAGCCACCAATGTTGCATGCCCCGAACAGACTCCGCTGGTTCCTGTTCCTCAGGAGCTCGATTCAGCGGCCCAGCCCGACCCGAATTCGCCCTCCGAGGACGTCTTGCGAGCGATCGTTCCGGTACCGCCGGAGCAGCAGGACGGCGCGGTGGCCACCGCCACCGTGCCGAGGCGGAAGCAGAGCCGGCAGAAGGAGCTGGTGAGAGTGATGGATCTGTCTCCGAGGGACGAGGCTCATTTGCGCGAGACCGTGAGGAGGACAAGGCTCATATACGACTCGCTGCGAGTGTTGACCTCCGTGGAGGAGGAGAAGCGAGTCGCCTCAGTGGCAGCGGCGGCGGTGGCAGCAGCAGCAGCAGTGACAACACTAGAGGGCTGTCTGCCGGTGGATGGCTCCACCGGCAAGTTGCGGCGTCTCCGGGGAGACCTGCGGGCTGCCAGCCTGATGAGAGAGCGTGGACTGTGGCTGAACCGTGACAAGAGGATCGTCGGGGCGATCCCCGGAATTATGGTTGGGGATTTGTTCCTTTTTCGGATGGAGTTGTGTGTGGTTGGATTGCACGGTCAGATACAGGCTGGAATAGATTTTCTTCCTGCAAGCATGAGTTCCACTGGAGAACCTATTGCTACCAGTGTCATTGTTTCTGGTGGCTATGAGGATGACATGGATGATGGTGAGGTTATAGTTTACACTGGCCATGGAGGGCAGGAGAAGAATTCCTCCAGGCAGATCTCTCATCAGAAGTTGGAGTCAGGGAACCTTGCATTGGAGAGGAGTATGCATTATGGTGTTGAGGTAAGGGTTATCCGTGGGATGAAGTATGAGGGGAGTGCTGCTGGGTCTGGTAAGGTGTATGTGTATGATGGGGTGTATAGGATTGTTGATTGCTGGTTTGATGTGGGGAGGTCGGGTTTTGGGGTTTATAAGTTTAAGCTTTGGAGGATTGAGGGGCAGGCTAAGATGGGTAGTGCTATTTTGAAGGAAGCTAGGAATGTTAGGAGGAGTGAGCTGGATTTGAATCCCACATCTGCTGATATGGCTAACAGGAAGGAGAATGTTGCAGTTCGGCTTTTTAATGACTTTGATGATGATCGGGGTCCTCTTTGCTATGAATATCTTGTGAGGACTTGTTTTCCGAAGTTTGTGTTTCATCAGAGTGGGAAAGCTACTGGCTGTGACTGTGTGGATGGTTGTGGTGATGGATGCTTTTGTGCTATGAAAAATGGGGGTGAGTTTCCTTACACTCTGCAGGGGCATCTTGTGAGAGGGAAGCCTTTGATTTTTGAATGTGGCCCATTTTGCTCCTGTCCTCCTCATTGTCGCAATCGTGTTGCGCAGAAGGGGCTGAAATATAGGTTGGAAGTGTTTAGGTCTAAGCAGACATCTTGGGGAGTAAGGTCCTTGGACCTTATTCAAGCTGGTTCTTTTATCTGTGAGTTTGCAGGGGTTGTTTTGACCAGGGAGCAAGCTCAACTCTTAACAATGAATGGTGATTCATTGATATATCCTAATCGGTTTTCGGAAAGGTGGGCAGAATGGGGGGATTTGTCTCAGATATACCCGGATTATGCAAACTCTCTATATGTAACTGAATGGTCCATGCACTTCTTGAGTTTTAGGCATGGTTTTGTGAGACTTAAACCGTGA 1881 0.5167 MDSVLPDTSTNAIASSTPTSHPHSQPSLPQTLLVPKPEPFWDTHIETSDELDLYSEFNRVTELFHFAFGATNVVDPFGATNVACPEQTPLVPVPQELDSAAQPDPNSPSEDVLRAIVPVPPEQQDGAVATATVPRRKQSRQKELVRVMDLSPRDEAHLRETVRRTRLIYDSLRVLTSVEEEKRVASVAAAAVAAAAAVTTLEGCLPVDGSTGKLRRLRGDLRAASLMRERGLWLNRDKRIVGAIPGIMVGDLFLFRMELCVVGLHGQIQAGIDFLPASMSSTGEPIATSVIVSGGYEDDMDDGEVIVYTGHGGQEKNSSRQISHQKLESGNLALERSMHYGVEVRVIRGMKYEGSAAGSGKVYVYDGVYRIVDCWFDVGRSGFGVYKFKLWRIEGQAKMGSAILKEARNVRRSELDLNPTSADMANRKENVAVRLFNDFDDDRGPLCYEYLVRTCFPKFVFHQSGKATGCDCVDGCGDGCFCAMKNGGEFPYTLQGHLVRGKPLIFECGPFCSCPPHCRNRVAQKGLKYRLEVFRSKQTSWGVRSLDLIQAGSFICEFAGVVLTREQAQLLTMNGDSLIYPNRFSERWAEWGDLSQIYPDYANSLYVTEWSMHFLSFRHGFVRLKP 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00917 626 ProSiteProfiles YDG domain profile. 242 392 IPR003105 -
Gma16g00917 626 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 29 614 - -
Gma16g00917 626 ProSiteProfiles Pre-SET domain profile. 468 526 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma16g00917 626 Gene3D SET domain 402 615 IPR046341 -
Gma16g00917 626 MobiDBLite consensus disorder prediction 1 33 - -
Gma16g00917 626 SUPERFAMILY SET domain 422 573 IPR046341 -
Gma16g00917 626 SMART G9a_1 237 396 IPR003105 -
Gma16g00917 626 MobiDBLite consensus disorder prediction 1 31 - -
Gma16g00917 626 Pfam Pre-SET motif 425 521 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma16g00917 626 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 29 614 - -
Gma16g00917 626 SUPERFAMILY PUA domain-like 223 408 IPR015947 -
Gma16g00917 626 SMART preset_2 421 513 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma16g00917 626 Gene3D - 239 401 IPR036987 -
Gma16g00917 626 Pfam SAD/SRA domain 241 396 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00917 Gma-Chr16 21189536 21195567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00917 125 576 Su(var)3-9 homologs AT5G04940 36.226 1.01e-84 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00917 K11420 - gmx:100785015 1188.71