Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00915 ATGAAAATAGGCTTAATACCAAAACCTATTAGTGGAATGATAGATCAAACAAAAGTAGATCAGCTGGTCCAGGATAAAACACAAACACAACGAAGATGCCATGACGATTTACTGGATGGGCGTCAAGGTGAAATCATTTTGGAGAATTCAAAGTCCTCTGCATGCTCTATATGCAAAAGTAGGTGTCCGAACAATGCATGGAAAAAAGACTTTAATTATGAGGAACTCCTAGAAGCTACAGAAGGATTTTCAATTGAGAACTCGTTATCAGAAAGAGAAGATGAACCTACTTTTGAGGGCTTGCTAGAGAGACAGGTAAAAATAGTTGTTAAGAAATATCAAGTTACTACATCCCACCAAGAGATGATATTAAAATCAGAAGTGCAGTTGTTCATCAGTGCTAGACATAAAAATGTGGTCATGTTGTTGGGTTTATGCACAAATAAAAGCCGACTGATGATTGTGTATGAGCAAGTATGCAACGGTTCACTTGAACAGTACCTAACAAGGGGAAGTTGCCAACCATTGACTTGGAAGCAAAGGCTGAAAGTGGCAATGGGTACTGCAAGAGGTTTAAAGTACCTACATGGGAATAACATAATTCATGGAAATATAAAACCAAGTAACATTCTTCTAACACATGACTTCGAACCACGGATTGGAGATTTTGACTTTGGAAAAGTGAAACATGGACCAAAGAAATCCAGCAAAGATAAAAGTGTATGGAATTCTGGATATGCAATACCTGAGTATGTTGAGAATGGAAAAGTATCAAATAAGACAGATGTGTACTCCTTTAGAGTGGTTCTTTTAGAGCTGATTAGTGGCCGGAGGGCTACAGACAAATTACCAGGTGGAAAAAGCCTTGTTTCCTGGGCTAGAGCGTTGCAACCTCTGCTTCACAGAGCTTGA 912 0.3882 MKIGLIPKPISGMIDQTKVDQLVQDKTQTQRRCHDDLLDGRQGEIILENSKSSACSICKSRCPNNAWKKDFNYEELLEATEGFSIENSLSEREDEPTFEGLLERQVKIVVKKYQVTTSHQEMILKSEVQLFISARHKNVVMLLGLCTNKSRLMIVYEQVCNGSLEQYLTRGSCQPLTWKQRLKVAMGTARGLKYLHGNNIIHGNIKPSNILLTHDFEPRIGDFDFGKVKHGPKKSSKDKSVWNSGYAIPEYVENGKVSNKTDVYSFRVVLLELISGRRATDKLPGGKSLVSWARALQPLLHRA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00915 303 Gene3D Transferase(Phosphotransferase) domain 1 159 302 - -
Gma16g00915 303 SUPERFAMILY Protein kinase-like (PK-like) 68 284 IPR011009 -
Gma16g00915 303 Pfam Protein tyrosine and serine/threonine kinase 104 279 IPR001245 GO:0004672|GO:0006468
Gma16g00915 303 ProSiteProfiles Protein kinase domain profile. 73 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00915 303 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 43 72 IPR017896 -
Gma16g00915 303 Gene3D Phosphorylase Kinase; domain 1 46 157 - -
Gma16g00915 303 PANTHER OS01G0253100 PROTEIN 1 295 IPR045271 GO:0004714|GO:0006468
Gma16g00915 303 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00915 Gma-Chr16 21018716 21021025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00915 71 303 Trihelix Transcription Factor Family AT1G70460 39.331 3.96e-48 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma16g00915 PK_Tyr_Ser-Thr 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00915 - - gsj:114401847 558.525