Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00911 ATGAGTGGTGGCAGGAGGAGGAAGCTGCGCTTAAGCAAGATCTACTCATTTGCATGCTGCAAGGCATCTTTTGAGGGAGATCATCATTCACAGATTGGAGGAAAAGGTTATTCCAGAGTGGTGTTCTGCAACGAGCCAGATAGCTTTGTTGAGGACGGTGTTAAGAATTTTGCAGACAATTCAGTCAGATCAACAAAATATACTCTTGCCACTTTCTTTCCCAAATCTTTGTTTGAACAGTTTAGGAGAGCGGCAAACTTCTATTTTTTGGTCACTGGCACCTTGGCCTTCACAAAACTTGCTCCATACACTGCTGTCAGTGCTATCCTTCCACTGATTATTGTTATTGGGGCAACCATGGTGAAAGAAGGTATTGAAGACTTGTGCCGGAAAAAACAGGATATTGAGGTGAACAATAGAAGAGTTAAAGTGCATAAAGCTGATGGTATTTTTGAATATACTGCATGGAAGAATGTGAGGGTGGGGAATATAGTGAAGGTTGAGAAGGATGAATTCTTCCCAGCTGACCTCCTGTTACTATCATCCAGTTATGACGATGCAGTTTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTAAAGTTAAAACAAGGGTTAGAGGTAACTTCTTCCTTACAGGAGGATCTCCATTTCCTAAATTTTAAAGCTACAGTGAAATGTGAAGATCCAAATGCAAATTTGTACTCATTTGTTGGGAGCATGGACTTTGAAGAGAAAAATAATGCCCTTTCTCCTCAGCAACTTCTTCTCCGCGACTCTAAACTTCGTAATACAGACTATATTTTTGGAGCTGTCATTTTCACTGGTCATGACACTAAGGTTATTCAAAATTCTACTGACCCACCTTCAAAAAGAAGCAGAATTGAAAAGAAGATGGACAGAGTCATCTATTTCTTGTTTTGCATTTTATTCCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTGCAACTAAAGATGACTTTCAAAATGGGTTGATGAAAAGATGGTATTTAACACCAGATGATTCTACTGTTTTCTTTGATCCAAAAAGACCAGCTGCTGCTGCTTTATTTCATTGTTTGACAGCCTTAATGTTATATGGGTTTTTTATTCCCATCTCTTTGTATGTGTCAATAGAAATTGTCAAAGTCCTTCAGAGCATTTTCATCAATCAAGATATCCATATGTACTACAGGGAAGCAGACAAACCAGCTCGAGCTCGTACTTCAAACTTGAATGAGGAGCTTGGCCAAGTTGATACAATACTTTCTGATAAGACTGGAACTCTTACCTGCAACTCAATGGAGTTCATTAAATGTTCAATTGCTGGGGTAGCTTATGGCCGTGGTGCTACAGAGGTTGAGAAGGCCATGGATAGAAGAAAAGGTTCACCATCAATTCATGAGCATGATATTGAATCAGAAGCAGATAACATTAGGGGTTCGCTAGATAAAAGGGCACTCATTAAAGGTTTTAACTTTGCTGATGAAAGAATAACAAATGGAAATTGGGTTAATGAGCCTCATGCAGATGTTATCCAGAAGTTTTTTCGCCTATTGGTGGTCTGTCATACAGCCATACCAGAAGTGGATGAAGAGACAGGTAATGTCTCATATGAGGCTGAATCCCCAGATGAAGCAGCATTTGTGATTGCAGCAAGAGAACTTGGTTTTGAATTTTACAAAAGGGGTCAGACTAGTTTATTGACATATGAGTTGGATCCAGTTTCTTGCAAGAAAGTTGAAAGCAGGAAGTACAAGCTTCTCAATTGTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAGATGAAGAAGGGAAAATTTTGCTTCTCTGCAAAGGTGCAGACAGCATCATGTTTGAAAGGCTTGCCAAGAATGGGAGGGAGTTTGAAGAGAAAACCATGGAGCATGTGCATGAGTATGCTGATGCAGGTCTACGAACCCTTATACTAGCCTATCGTGAACTTGATGCAGAAGAATACAAGGAGTTTGATAATAAATTCTCTATGGCAAAGAATTTAGTTAGTGCTGATCAGGATATACTGATTGAGGAAGTATCGGAAAAGATTGAGAAGAACCTAATTCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAGATGGGGTTCCTGAATGCATTGACAAGCTTGCCCGAGCAGGAATTAAAATTTGGGTTTTGACAGGGGATAAAATGGAGACTGCAATCAATATTGGTTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATTTGGATAGTCCAGAAATTCAAGCACTAGAGAAGGATGGAGACAAGATGGCTATTGCAAAGGCATCAAGGCAAAGTGTACTCCTTCAGATATCTGATGGTGCTGCACAACTCACTGCATACAGAGGGAGCTCTCATCAGGCCTTTGCTCTGATTATTGATGGAAAATCACTTGCTTATGCATTAGAAGATAATATGAAGAACATGTTTCTGGAGCTTGCGATTCGCTGTGCATCTGTTATTTGCTGTCGCTCATCACCAAAGCAGAAGGCAATGGTCACTAGATTGGTCAAATCTGGAGCCAGGAAAACAACATTAGCTATTGGTGATGGAGCTAACGATGTGGGAATGCTTCAAGAAGCAGATATAGGGGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCACAATTCCGGTATTTGGAACGGTTACTTCTGGTGCATGGACATTGGTGTTACCGGAGGATCTCATCTATGATATGCTATTTTTTCTACAAGAATATCACATTTGGTTTTACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGACAAGCTGCATACAACGACTGGTTTTTGTCTCTCTATAATGTTTTCTTTTCGTCACTTCCTGTGATTGCACTTGGGGTATTTGATCAGGATGTATCCGCTCGGTACTGCCTGAAGTTTCCTTTGTTATATCAAGAAGGAGTACAGAATGTTCTTTTCAGTTGGCGTCGAATACTCAGCTGGATGCTTAATGGATTTATCAGTGCCTTAATAATTTTCTTCTTCTGCACAAAAGCGATGGAGCTCCAGGCCTTCGATGTGGAGGGGAGAACTGCTGGAAAGGATATACTGGGAGCAGCAATGTATACTTGTGTAGTTTGGGTTGTAAACCTGCAAATGGCACTAGCTCAATTCGGATGCGGTTCTTTCCCATGTATCATGAAACAGTGCAATGGATAA 3258 0.4024 MSGGRRRKLRLSKIYSFACCKASFEGDHHSQIGGKGYSRVVFCNEPDSFVEDGVKNFADNSVRSTKYTLATFFPKSLFEQFRRAANFYFLVTGTLAFTKLAPYTAVSAILPLIIVIGATMVKEGIEDLCRKKQDIEVNNRRVKVHKADGIFEYTAWKNVRVGNIVKVEKDEFFPADLLLLSSSYDDAVCYVETMNLDGETNLKLKQGLEVTSSLQEDLHFLNFKATVKCEDPNANLYSFVGSMDFEEKNNALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDRVIYFLFCILFLMAFVGSIFFGIATKDDFQNGLMKRWYLTPDDSTVFFDPKRPAAAALFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYREADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGATEVEKAMDRRKGSPSIHEHDIESEADNIRGSLDKRALIKGFNFADERITNGNWVNEPHADVIQKFFRLLVVCHTAIPEVDEETGNVSYEAESPDEAAFVIAARELGFEFYKRGQTSLLTYELDPVSCKKVESRKYKLLNCLEFNSSRKRMSVIVEDEEGKILLLCKGADSIMFERLAKNGREFEEKTMEHVHEYADAGLRTLILAYRELDAEEYKEFDNKFSMAKNLVSADQDILIEEVSEKIEKNLILLGATAVEDKLQDGVPECIDKLARAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLDSPEIQALEKDGDKMAIAKASRQSVLLQISDGAAQLTAYRGSSHQAFALIIDGKSLAYALEDNMKNMFLELAIRCASVICCRSSPKQKAMVTRLVKSGARKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQAAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFISALIIFFFCTKAMELQAFDVEGRTAGKDILGAAMYTCVVWVVNLQMALAQFGCGSFPCIMKQCNG 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00911 1085 CDD P-type_ATPase_APLT_Dnf-like 59 1029 - -
Gma16g00911 1085 Pfam Phospholipid-translocating P-type ATPase C-terminal 897 1069 IPR032630 -
Gma16g00911 1085 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 706 IPR023299 GO:0000166
Gma16g00911 1085 Gene3D - 125 288 - -
Gma16g00911 1085 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1069 - -
Gma16g00911 1085 SFLD p-type atpase 410 920 IPR044492 -
Gma16g00911 1085 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Gma16g00911 1085 SFLD Haloacid Dehalogenase 410 920 - -
Gma16g00911 1085 Gene3D - 549 703 IPR023299 GO:0000166
Gma16g00911 1085 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 840 952 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma16g00911 1085 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1062 IPR023298 -
Gma16g00911 1085 SUPERFAMILY HAD-like 421 924 IPR036412 -
Gma16g00911 1085 SUPERFAMILY Calcium ATPase, transduction domain A 142 285 IPR008250 -
Gma16g00911 1085 PRINTS P-type cation-transporting ATPase superfamily signature 869 888 - -
Gma16g00911 1085 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Gma16g00911 1085 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1070 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gma16g00911 1085 Pfam Phospholipid-translocating ATPase N-terminal 54 108 IPR032631 -
Gma16g00911 1085 Pfam Cation transport ATPase (P-type) 535 630 - -
Gma16g00911 1085 Gene3D - 704 909 IPR023214 -
Gma16g00911 1085 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1069 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00911 Gma-Chr16 20617456 20623974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00911 9 1069 Primary Pumps ATPases AT1G68710 74.220 0.0 1670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00911 K01530 - gmx:100792960 2105.49