Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00891 ATGGATGAGAACATGAAACAGTTCCAAAAGAAATTAACAGAACTGGAAGTGGAAGCTGAGCATATTCTTTTAGCCCGACATCAGCTGGTTGAGAACGATAGATTGAGAAATGGGAATAGAGAAGCACTTACTGCATTAAGGAAAAGGGCTCGAACAACAAAGAGCAGTGTTCCATCTCCTTTTGAATCAATAATGAAGGGAGTTGCAGGGTCCAGCTCAAGACCTTTGGTGCAAGAGGTTTGCACCACCTGTGGCAAACATGACTCTTCTGAGCAGACGTGGATGATGTTTCCAGGAACTGATCTGTTTGCCAGAATTCCATTTCATGCGGCTCATACTATATTGGAAACAGATCAAACGCAGCTTGACTTTGAGTCAAAGAGACTACAGAGCATTGTGAAGGAAAAATCTTACATTATATCAGAGGCAGGTGTTCTTGCAGACAAGATAAGTCCTGGAGTGCTCAAATCACTTAATCAAGAAATTATTGCAATCAAGGCTCCAAAAGCTAGTTGCATCGAGGTCCCTGATCCTGATGAGGAATTAGGTTTTCGGCAAAGGCAGTACAAAATGATTGTTCGAAGTGCCATTGGACCAATAAATTTGTATCTCTTGAGCAAGGACGACCGCAAGTTTGAGGATGATAGTGCCAACCGGATGAAATTAATGGATCCATCATGGAATAGTGATTCCATCAGAAAGAGGGGTGTGGGATTATTAGAAAGCCAACATGATGAAAAAAAAAATCCTTCTGAGCGTTTCAGTTTGCAGGGTTCACAAGCATTTGGAATTCAAGAAATTACTCCCACGGATTTTGAAATGGAAGATGACTATTGGTTTCAATCAGATCCTGGAGTGAGCCAAATAGAATTGTAG 876 0.4132 MDENMKQFQKKLTELEVEAEHILLARHQLVENDRLRNGNREALTALRKRARTTKSSVPSPFESIMKGVAGSSSRPLVQEVCTTCGKHDSSEQTWMMFPGTDLFARIPFHAAHTILETDQTQLDFESKRLQSIVKEKSYIISEAGVLADKISPGVLKSLNQEIIAIKAPKASCIEVPDPDEELGFRQRQYKMIVRSAIGPINLYLLSKDDRKFEDDSANRMKLMDPSWNSDSIRKRGVGLLESQHDEKKNPSERFSLQGSQAFGIQEITPTDFEMEDDYWFQSDPGVSQIEL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00891 291 Gene3D - 111 208 - -
Gma16g00891 291 Coils Coil 5 25 - -
Gma16g00891 291 SUPERFAMILY E2F-DP heterodimerization region 159 208 IPR037241 -
Gma16g00891 291 Pfam E2F transcription factor CC-MB domain 158 205 IPR032198 GO:0046983
Gma16g00891 291 PANTHER P53 AND DNA DAMAGE-REGULATED PROTEIN 1 159 IPR030482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00891 Gma-Chr16 20273623 20281820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00891 155 291 E2F-DP Transcription Factor Family AT2G36010 34.395 1.07e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00891 - - gmx:100306543 311.997