Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00881 ATGGCGACGCTGCTAAGAAAACTGTGCGAATCGGCGACGATGAAGCGATCCGGCTCTCACTCTCACCCTCACCCTCTCCCGTCCTCGGAACAAGCACGCCCATCCTCCCCTCTTGGCGCCTTCGACCCTCTCCCTGCCGACATCCTCATGCAAATCGTCCGCCTCTTAGGCCCCAAACACGCTGCCAGACTCTGCCTCGTTTCCAAGTCTTGGCGGTCACTCGTCTCCGACAACGCCCTCTGGGCCCACTTCCTCCAAACCCACCACCCCCACTCCCCGCTCTTCGCCGAAACCGCCCTCAGCTCCGGCTACCCTCTCCCGACCTTGCCTGCTCAGAATTCACCACGTGTCTCGTTCCAGCATGCTTACGCGCTGCGTGAACGAGTCCCTCCTTCTGTTGTCATCGACGGGGGTTCTGGCTATTGCAAATTCGGTTGGAGCAAAGGGGCCTCTCCTTCGGGGAGATTTGCTACTTTTTTGGAATTTGGTAACGTTGAGACGCCTATGTATACTAGACTGCGACATTTTTTCTCCACTATCTATAACAGGATGCAGGTGAAACCAAGTTCTCAACCTGTTGTTGTTTCTATACCAATATGCCACTATGACGATACCGAATCAGCCAAAGCATCAAGACAACAACTTAAAGAAGCAATCTATGTTGTCTTGTTTGACATGAATGTTCCTGCTGTATGTGCTCTCAATCAGGGTACTTTAGCTCTGTATGCTGCAAATCAAACATCTGGGATAGCTGTTAATATAGGCTTTCAAGTCACATCTATAGTTCCAATTTTAAATGGTAAAGTGATGCGAAAGGTGGGTGTGGAGGTTGTGGGGCTGGGAGCACTAAAACTTACTGGATTTCTTAGAGAACAAATGCAACAAAACAACATAAGTTTTGAATCTTTGTACACTGTTCGCACACTGAAAGAGAAGCTATGTTATGTTGCTGTTGACTATGAAGCTGAGCTTTTGAAAGATACTCAAGCATCATTTGAAGCTGTAGAAGGGTTGTTTACACTCTCAAAAGAGCGGTTTCAAACAGGAGAGATCTTATTCCAGCCACGTCTTGCTGGGGTGCGAGCAATGGGTTTGCATCAGGCCATCGCTCTTTGTGTGGATCATTGCTATTCTGCAGAATTGGCAGGCAACAACGATTGGTATAAGACTGTTGTCTTATCAGGGGGAACTGCGTGTTTACCTGGTTTAGCAGAAAGGTTAGAAAAGGAACTCCATTCATTACTTCCTCCTTATATGTCCAATGGAATTAGAGTCATACCTCCTCCATTTGGTGTGGATACTGCATGGTTTGGTGGAAAGATTATTAGCAGTTTGAGCACCTTTCCTGGCCCGTGGTGTACAACGAAAAAGCAATTCCGTCAGAAGTCTAAACTTAACCGCATTTGGTGA 1410 0.4766 MATLLRKLCESATMKRSGSHSHPHPLPSSEQARPSSPLGAFDPLPADILMQIVRLLGPKHAARLCLVSKSWRSLVSDNALWAHFLQTHHPHSPLFAETALSSGYPLPTLPAQNSPRVSFQHAYALRERVPPSVVIDGGSGYCKFGWSKGASPSGRFATFLEFGNVETPMYTRLRHFFSTIYNRMQVKPSSQPVVVSIPICHYDDTESAKASRQQLKEAIYVVLFDMNVPAVCALNQGTLALYAANQTSGIAVNIGFQVTSIVPILNGKVMRKVGVEVVGLGALKLTGFLREQMQQNNISFESLYTVRTLKEKLCYVAVDYEAELLKDTQASFEAVEGLFTLSKERFQTGEILFQPRLAGVRAMGLHQAIALCVDHCYSAELAGNNDWYKTVVLSGGTACLPGLAERLEKELHSLLPPYMSNGIRVIPPPFGVDTAWFGGKIISSLSTFPGPWCTTKKQFRQKSKLNRIW 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00881 469 Gene3D Actin; Chain A, domain 4 280 362 - -
Gma16g00881 469 Gene3D - 29 128 - -
Gma16g00881 469 SUPERFAMILY F-box domain 31 107 IPR036047 GO:0005515
Gma16g00881 469 SUPERFAMILY Actin-like ATPase domain 131 252 IPR043129 -
Gma16g00881 469 PANTHER ACTIN 91 465 IPR004000 -
Gma16g00881 469 CDD NBD_sugar-kinase_HSP70_actin 133 277 - -
Gma16g00881 469 ProSiteProfiles F-box domain profile. 38 84 IPR001810 GO:0005515
Gma16g00881 469 Gene3D - 133 461 - -
Gma16g00881 469 MobiDBLite consensus disorder prediction 14 35 - -
Gma16g00881 469 SMART fbox_2 44 84 IPR001810 GO:0005515
Gma16g00881 469 PANTHER ACTIN-RELATED PROTEIN 8 91 465 - -
Gma16g00881 469 Pfam Actin 179 455 IPR004000 -
Gma16g00881 469 Pfam F-box-like 44 84 IPR001810 GO:0005515
Gma16g00881 469 SMART actin_3 130 459 IPR004000 -
Gma16g00881 469 MobiDBLite consensus disorder prediction 12 37 - -
Gma16g00881 469 Gene3D - 237 434 - -
Gma16g00881 469 SUPERFAMILY Actin-like ATPase domain 247 456 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00881 Gma-Chr16 20018544 20031933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00881 179 452 Cytoskeleton Gene Families AT3G12110 33.451 4.65e-42 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00881 K16616 - gmx:100804254 931.013