Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00871 ATGTTCTTTGCTTCATGGTTTTGTATATGTGTTTTTGATGGTTGTATCAGGTGGTCACGGATTGCAGCTCAATTATCAGGAAGAACTGATAATGAGATAAAGAATCTATGGAATTCCTTCCTAAAGAAGAAGCATAGGCAAAGAGGCATTCACCCTAACACACACCAACCCCTCTCTGAGATTGAGAATGACAAGGACAAGCCTATAACAGCTAACAAAAGCAACCAGAAAGCCTCCAATGAGGTGATGAGTCTTGTTGAGCCACCAAAACCAAAGCCAATAGCTACTACTGCAACTACTTCTATGCCTATGGATAGATATTCCCTTGAAGTTTCTTCCACCTCCAAGATCAGCAGTGGCAACAACAACAACACCCTAGACAGGTTTGACAACTCTATGACTAGTTCTGATATGATGGGAATGTGA 426 0.4131 MFFASWFCICVFDGCIRWSRIAAQLSGRTDNEIKNLWNSFLKKKHRQRGIHPNTHQPLSEIENDKDKPITANKSNQKASNEVMSLVEPPKPKPIATTATTSMPMDRYSLEVSSTSKISSGNNNNTLDRFDNSMTSSDMMGM 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00871 141 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 45 IPR017930 -
Gma16g00871 141 ProSiteProfiles Myb-like domain profile. 14 41 IPR001005 -
Gma16g00871 141 MobiDBLite consensus disorder prediction 94 141 - -
Gma16g00871 141 MobiDBLite consensus disorder prediction 44 141 - -
Gma16g00871 141 SUPERFAMILY Homeodomain-like 16 51 IPR009057 -
Gma16g00871 141 PANTHER MYB DOMAIN PROTEIN 55 17 130 - -
Gma16g00871 141 CDD SANT 14 41 IPR001005 -
Gma16g00871 141 PANTHER HOMEODOMAIN-RELATED 17 130 - -
Gma16g00871 141 Gene3D - 11 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00871 Gma-Chr16 17820361 17820786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00871 17 81 MYB Transcription Factor Family AT1G09540 64.179 4.17e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00871 K09422 - gmx:778182 221.861