Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00868 ATGGGCAGTAGTGACATGGACAAAACCCCGAAAGAGGAGTCTAAGACACCTCCAGCTACGTCACAGGAGCAGTCATCAACAACTGGCATGCCAACAACTAATCCTGACTGGTCTAACTTTCAGACGTATTCTCCTATACCTCCACATGGGTTCTTGGCATCAAGCCCCCAAGCCCACCCATATATGTGGGGCGTCCAGCATATTATGCCTCCCTATGGCACTCCACCTCATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATTCCTCCGGGATCTTATCCTTTCAGTCCTTTTGCCATGGCTTCTCCAAATGGTATTGCAGATGCTTCAGGAAATGCCCCAGGTAGCATCGAAGTTGGTGGTAAACCTCCTGAAATGAAGGAAAAATTACCTATCAAAAGATCAAAAGGAAGTGTTAGTGGTGGTAATTTGAGCATGTGGATTACTGGGAAAAATAATGAACCTGGTAAAACACCAGGAGAATCTGCTAATGGGATTCATTCCAAAAGTGGTGAAAGTGCAAGTGACGGAACTAGTGAAGGAAGTGATGAGAACTCCCAGAATGACTCTCAATTGAAATCCGGGGAGAAGCAGGACTCTTTTGAAGATGAACCATCTCAAAATGGCAGTCCAGTACATGCTCCTCAAAATGGGGTACATAATAGATCTCAGACAGTTGTTAATCAAACTATGCCTATCTTACCTATATCTTCCACAAGTGCTAGTGGAGCAGTTCCTGGTCCCACAACTAATTTAAATATAGGAATGGATTATTGGGGCACACCAACTTCATCCACCATTCCTGCACTGCATGGAAAGGTTCCTTCTGCTGCAGTTGCTGGAGGGATGATTGCTGCTGGATCACGAGATGGCGTTCAGCCACAAGTTTGGCTGCAGGACGAAAGAGAGCTTAAAAGACAAAGACGGAAACAGTCTAATCGGGAGTCTGCACGCAGATCCAGGTTACGGAAGCAGGCCGAATGTGATGAACTAGCTCAGCGTGCTGAAGCTTTGAAAGAAGAAAATGCCAGTCTCCGATCAGAAGTGAGCCGGATCAGGAGTGAGTATGAGCAGCTACGTTCTGAGAATGCTGCCCTCAAGGATAGACTTGGGGAGATACCTGGTGTCACGACACCTGGGAAGGAGGATCTTAGGTCTGGCCAGAATGATCAGCATGTGAGTAATGACACTCAACAAAGTGGTCAGACAGATGTTGTGCATGGTGTTCATTAG 1251 0.4652 MGSSDMDKTPKEESKTPPATSQEQSSTTGMPTTNPDWSNFQTYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSIPPGSYPFSPFAMASPNGIADASGNAPGSIEVGGKPPEMKEKLPIKRSKGSVSGGNLSMWITGKNNEPGKTPGESANGIHSKSGESASDGTSEGSDENSQNDSQLKSGEKQDSFEDEPSQNGSPVHAPQNGVHNRSQTVVNQTMPILPISSTSASGAVPGPTTNLNIGMDYWGTPTSSTIPALHGKVPSAAVAGGMIAAGSRDGVQPQVWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSEYEQLRSENAALKDRLGEIPGVTTPGKEDLRSGQNDQHVSNDTQQSGQTDVVHGVH 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00868 416 Pfam bZIP transcription factor 307 369 IPR004827 GO:0003700|GO:0006355
Gma16g00868 416 Gene3D - 310 363 - -
Gma16g00868 416 MobiDBLite consensus disorder prediction 1 42 - -
Gma16g00868 416 Coils Coil 327 375 - -
Gma16g00868 416 CDD bZIP_plant_GBF1 312 362 IPR045314 GO:0003700|GO:0006355
Gma16g00868 416 Pfam G-box binding protein MFMR 1 95 IPR012900 -
Gma16g00868 416 SMART brlzneu 307 371 IPR004827 GO:0003700|GO:0006355
Gma16g00868 416 MobiDBLite consensus disorder prediction 117 225 - -
Gma16g00868 416 MobiDBLite consensus disorder prediction 144 200 - -
Gma16g00868 416 MobiDBLite consensus disorder prediction 309 332 - -
Gma16g00868 416 MobiDBLite consensus disorder prediction 396 416 - -
Gma16g00868 416 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 314 329 IPR004827 GO:0003700|GO:0006355
Gma16g00868 416 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 416 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gma16g00868 416 SUPERFAMILY Leucine zipper domain 310 367 IPR046347 GO:0003700|GO:0006355
Gma16g00868 416 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 416 - -
Gma16g00868 416 MobiDBLite consensus disorder prediction 368 416 - -
Gma16g00868 416 Pfam Disordered region downstream of MFMR 134 274 - -
Gma16g00868 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 309 372 IPR004827 GO:0003700|GO:0006355
Gma16g00868 416 MobiDBLite consensus disorder prediction 210 225 - -
Gma16g00868 416 MobiDBLite consensus disorder prediction 15 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00868 Gma-Chr16 17272429 17285889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00868 1 410 bZIP Transcription Factor Family AT2G35530 58.711 8.96e-155 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma16g00868 MFMR_assoc 4.3e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00868 K09060 - gmx:780552 853.588