Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00855 ATGGGTTTTCTAACTCTCACTAATTACTTGATTTTTTTGCTCATATTTTCCAGCTTCTATATGGGTGTAATCTCTGTGAATGATACCATCACATCAACCAGATTCATCAGGGACCCTGAGACTATAATCTCAAGCAACGGTGACTTCAAGCTAGGATTCTTCAGCCCTGAAAAATCCACACATCGCTATGTAGCTATCTGGTATCTCGCTGAAACCTACATCATATGGATAGCCAATAGAGACCAACCACTTAGTGATTTATCTGGGCCTGGGGTGTTCAAAATTCACAAGGATGGGAATCTTGTGGTATTGAATGCACAAAATAGGGTCATATGGTCAACAAATGTGTCAATTACTGCTACCAATACAACTGCTCAACTTGATGATTCGGGAAATCTGATCCTGCGTGATGTCACAAATGGAAAAACATTATGGGACAGTTTCACACACCCTGCTGATGCTGCAGTGCCATCGATGAAGATTGCTGCCAACAGGCTCACAGGTAAGAAAATCGAGTATGTGTCATGGAAAAGCAGTTCAGATCCTTCTTCTGGGTACTTCACAGGGAGCCTTGAACGGTTGGATGCTCCAGAAGTCTATTTTTGGTACAACAAAACAAAGCCATATTGGAGAACTGGTCCATGGAATGGAAGGGTCTTCCTTGGGTCACCAAGGATGTCAACTGAGTACCTATATGGCTGGCGTTTTGAGCCTAATGATAGTGGAACAGCTTATCTAACCTACAACTTTGAAAACCCTTCTATGTTTGGAGTCCTGACCATAAGTCCACATGGAACACTTAAATTGGTAGAGTTTTTGAACAAAAAGATATTTCTGGAGCTTGAGGTGGATCAAAATAAGTGTGACCTTTATGGGACATGTGGGCCTTTTGGAAGCTGTGATAACTCAACATTACCAATTTGCAGCTGTTTTGAGGGGTTTGAGCCCAGAAATCCAGAGGAATGGAACAGGGAAAATTGGACTAGTGGATGTGTGAGGAATGTGCAACTGAATTGTGGCAAGTTGAATAATACGAGTGATGTTCAACAAGATCGGTTTCGGGTGTACCAAAATATGAAAGTGCCTGACTTTGCAAAGAGATTATTAGGTAGTGACCAAGACAGATGCGGAACAAGTTGCTTAGGAAATTGCTCTTGCTTGGCATATGCATATGATCCTTACATTGGTTGCATGTATTGGAATAGTGACTTGATTGATTTGCAGAAATTTCCAAATGGAGGGGTTGATCTCTTCATTCGTGTGCCAGCAAATCTTCTAGTTGCAGCAGCGGGTGGTAAAAAGAGAAGAGAAAACATGGGATTACTCATTGGCATTACTGGGGCAATTGGAGCATTAATCATAGCTGTCGGTGCTTATCTTTTGTGGCGGAAGTTTACTCCTAAGCATACAGGAAATCAGCCTCAAAACATGATTACCGGAGACCAAAAACAAATTAAACTGGAAGAGCTGCCACTGTTTGAATTCGAAAAGCTATCAACTGCTACAAACAACTTTCACTTGGCCAATATGCTTGGCAAGGGAGGTTTTGGTCCGGTATACAAGGGGCAATTGGATAACGGACAAGAAATTGCCGTGAAAAGACTTTCAAAAGCATCTGGACAAGGATTGGAAGAATTTATGAATGAAGTTGTTGTGATTTCTAAACTTCAACATCGCAATCTAGTGAGACTTCTTGGTTGTTGTATAGAACGAGATGAACAAATGTTGGTATATGAGTTTATGCCAAATAAAAGTTTGGATTCATTTCTATTTGATCCACTCCAAAGGAAAATACTAGATTGGAAAAAACGCTTCAACATAATTGAAGGAATAGCTAGAGGAATACTTTATCTTCATAGAGACTCAAGACTAAGGATTATACACAGAGATCTTAAAGCAAGCAACATCTTACTAGATGATGAGATGCATCCCAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAGAAGTGGTGATGATGATGAAGCTAACACGAAAAGGGTTGTTGGAACTTATGGTTATATGCCGCCTGAATATGCAATGGAGGGAATTTTCTCAGAAAAATCAGATGTCTATAGCTTTGGAGTGTTGTTGCTAGAGATTGTAAGCGGACGAAGAAACACTAGCTTTTATAACAATGAGCAATCACTTAGCCTTGTTGGATATGCATGGAAACTATGGAATGAAGGCAACATCAAGTCTATAATAGATCTAGAGATACAGGATCCAATGTTCGAAAAGAGTATATTGAGGTGCATACATATAGGACTTCTATGTGTGCAAGAACTTACAAAAGAAAGACCAACTATCTCCACTGTGGTTTTGATGCTCATAAGTGAGATTACACATCTTCCTCCTCCAAGGCAAGTTGCATTTGTTCAGAAACAAAATTGTCAAAGTTCAGAGTCTTCTCAAAAAAGTCAATTTAATTCAAACAACAATGTAACTATAAGTGAAATTCAAGGTAGATAA 2472 0.3948 MGFLTLTNYLIFLLIFSSFYMGVISVNDTITSTRFIRDPETIISSNGDFKLGFFSPEKSTHRYVAIWYLAETYIIWIANRDQPLSDLSGPGVFKIHKDGNLVVLNAQNRVIWSTNVSITATNTTAQLDDSGNLILRDVTNGKTLWDSFTHPADAAVPSMKIAANRLTGKKIEYVSWKSSSDPSSGYFTGSLERLDAPEVYFWYNKTKPYWRTGPWNGRVFLGSPRMSTEYLYGWRFEPNDSGTAYLTYNFENPSMFGVLTISPHGTLKLVEFLNKKIFLELEVDQNKCDLYGTCGPFGSCDNSTLPICSCFEGFEPRNPEEWNRENWTSGCVRNVQLNCGKLNNTSDVQQDRFRVYQNMKVPDFAKRLLGSDQDRCGTSCLGNCSCLAYAYDPYIGCMYWNSDLIDLQKFPNGGVDLFIRVPANLLVAAAGGKKRRENMGLLIGITGAIGALIIAVGAYLLWRKFTPKHTGNQPQNMITGDQKQIKLEELPLFEFEKLSTATNNFHLANMLGKGGFGPVYKGQLDNGQEIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIERDEQMLVYEFMPNKSLDSFLFDPLQRKILDWKKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDDEMHPKISDFGLARIVRSGDDDEANTKRVVGTYGYMPPEYAMEGIFSEKSDVYSFGVLLLEIVSGRRNTSFYNNEQSLSLVGYAWKLWNEGNIKSIIDLEIQDPMFEKSILRCIHIGLLCVQELTKERPTISTVVLMLISEITHLPPPRQVAFVQKQNCQSSESSQKSQFNSNNNVTISEIQGR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00855 823 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Gma16g00855 823 Gene3D Phosphorylase Kinase; domain 1 479 580 - -
Gma16g00855 823 SUPERFAMILY Protein kinase-like (PK-like) 490 798 IPR011009 -
Gma16g00855 823 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Gma16g00855 823 SMART blect_4 33 151 IPR001480 -
Gma16g00855 823 Pfam D-mannose binding lectin 74 177 IPR001480 -
Gma16g00855 823 SMART serkin_6 505 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00855 823 CDD STKc_IRAK 511 777 - -
Gma16g00855 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Gma16g00855 823 Pfam Protein tyrosine and serine/threonine kinase 506 773 IPR001245 GO:0004672|GO:0006468
Gma16g00855 823 Pfam PAN-like domain 349 407 IPR003609 -
Gma16g00855 823 MobiDBLite consensus disorder prediction 801 823 - -
Gma16g00855 823 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 822 - -
Gma16g00855 823 Gene3D - 22 150 IPR036426 -
Gma16g00855 823 ProSiteProfiles Protein kinase domain profile. 505 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00855 823 CDD PAN_AP_plant 335 422 - -
Gma16g00855 823 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 17 822 - -
Gma16g00855 823 CDD B_lectin 33 151 IPR001480 -
Gma16g00855 823 Gene3D Transferase(Phosphotransferase) domain 1 581 785 - -
Gma16g00855 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 182 IPR036426 -
Gma16g00855 823 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Gma16g00855 823 SMART ntp_6 348 421 IPR003609 -
Gma16g00855 823 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Gma16g00855 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00855 Gma-Chr16 15534315 15541413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00855 493 823 Receptor kinase-like Gene Family AT4G11530 55.917 8.83e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma16g00855 PK_Tyr_Ser-Thr 4.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00855 - - gmx:100811896 1634