Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00842 ATGTCTCTTCCAAGACCCAGTGAGGGTAAAGCCCCTTCTCAGCTGAAAGAAGGAGTAGCACCTGCTGCTGCTGCAGCCTCATCCTCTTCTTCATGGAATAATAGGCTACACACTTTCCCTCCTTTGTCTCTACACAACAAGAGTAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCTGATGTGGAAACCACACCAGTTAGTGTTCATTCTGCAGCGACTCTTCAAAATAGTAACCTTACTCAACGTAATGTGACAGACCCTCAATTTCAAACTGGCTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCAGATAAGGAACATAGACGCCTCAAGAGGTTGTTGCGAAACAGGGTCTCTGCCCAACAAGCCCGCGAAAGAAAGAAGGTTTATGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGCAAGATAAAAACGCTATCTTAGAAGAACGTATCTCTACTTTAATCAATGAGAACACCATGCTGCGGAAGGTTCTTATGAACGCGAGGCCAAAAACTGATGATAGCATTGAACAAAAGCAAGACCAGTTAAGTAAGAGCTAA 576 0.441 MSLPRPSEGKAPSQLKEGVAPAAAAASSSSSWNNRLHTFPPLSLHNKSSKIEDSDEDMFTVPDVETTPVSVHSAATLQNSNLTQRNVTDPQFQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELQDKNAILEERISTLINENTMLRKVLMNARPKTDDSIEQKQDQLSKS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00842 191 Coils Coil 128 162 - -
Gma16g00842 191 CDD bZIP_HY5-like 122 163 - -
Gma16g00842 191 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 21 191 IPR044280 GO:0000981|GO:0045944
Gma16g00842 191 MobiDBLite consensus disorder prediction 87 110 - -
Gma16g00842 191 Pfam bZIP transcription factor 109 168 IPR004827 GO:0003700|GO:0006355
Gma16g00842 191 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 21 191 - -
Gma16g00842 191 Gene3D Single helix bin 131 172 - -
Gma16g00842 191 MobiDBLite consensus disorder prediction 1 55 - -
Gma16g00842 191 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 110 173 IPR004827 GO:0003700|GO:0006355
Gma16g00842 191 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 115 130 IPR004827 GO:0003700|GO:0006355
Gma16g00842 191 SUPERFAMILY Leucine zipper domain 112 171 IPR046347 GO:0003700|GO:0006355
Gma16g00842 191 MobiDBLite consensus disorder prediction 24 47 - -
Gma16g00842 191 SMART brlzneu 108 172 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00842 Gma-Chr16 15062591 15066211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00842 91 180 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 76.923 2.66e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma16g00842 bZIP_1 6.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00842 K16241 - gmx:778143 363.229