Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00841 ATGGACTTCAGGGATGCATGGGCTGGCTTCTTTCTGTTTTGCAGCTTCTGGCTTGTCACTTTCTGTGAACAAGATGGTTTCTTGAGTCTTTCTTGTGGTGGAAGAACCAGTTTCAGGGATACATCTAATATTTCATGGGTACCAGACACCTCCTACATAACCACAGGCAAGACTACCACCATCACTTACAGTGATGACTCCTCCGCATTGAACATCTCAGCTCGCTTCTTCCTGAATTCCAGAAGGCGAAAATGCTACAGAATACCAGTAAACAATTCAACAACTTTGGTTCTGGTTAGAGCAACATTTTTGTACAAGAACTATGATGGACTTGGGAAACCCCCTAAGTTCTCTGCTTCTATTGGGACAGCTATTGCTGCAACCATAAATCTTGCTGAATCTGATCCATGGAGTGAAGAGTTTCTATGGACTGTCAACAAGGATACACTGTCATTCTGCTTAAATGCAATTCCAAAAGGTGGTTCACCTGTTATTTCTTCCCTTGAAATCAGACCACTTCCTCAAGGAGCCTACACAAATGGCATGGCAGATTTTCCTAATAAGTTGCTTAGGAAGAGTTATAGAATTGATTGTGGACACTCCAATGGTTCTATAAGGTATCCCTTGGATCCATTTGATAGGATATGGGATGCTGATAGAAGTTTCACACCATTTCATGTTGCAACTGGGTTTAAGATTCAACTTAGCTTCAAACAGTCTAGTCTTGAGGAAAAACCACCACCAGCTATTCTTCAAACTGGGAGAGTTTTGGCTCGAAGAAATACGCTGACATACAGCCTCCCTCTTGATGCATTAGGGGACTACTACATCATCCTCTACTTTGCTGGAATTCTTCCTGTCTTTCCCTCATTTGATGTCCTTATAAATGGAGAACTGGTAAAATCAAACTACACAATAAATAGCTCAGAAACCAGTGCTTTATACCTAACACGAAAGGGAATTGGCAGCTTGAATATAACATTAAAGAGTATCAGCTTTTGCCCTCAGATCAATGCATTTGAGGTTTATAAGATGGTTGATGTTCCATCTGATGCCTCCTCAACCACAGTTTCAGCATTGCAGGTTATTCAGCAATCCACTGGATTGGATCTTGGATGGCAGGATGATCCATGCCTTCCTTCCCCATGGGAGAAAATTGAATGTGAAGGAAGCCTTATTGCATCATTGGATCTTTCAGACATAAATTTGAGATCGATTAGTCCTACATTCGGTGACTTGTTAGACCTTAAAACATTGGATTTGCACAACACATTGCTTACTGGTGAAATTCAGAATTTGGATGGCTTGCAACATCTTGAGAAACTGAACCTGAGTTTCAATCAACTAACATCCATTGGTGCAGATCTACAGAACTTGATTAACCTTCAAATACTAGACTTGCAGAACAATAATCTAATGGGAGTAGTGCCTGATAGCTTGGGAGAGTTAGAGGACCTCCACTTACTGAATCTGGAAAACAACAAACTACAAGGTCCACTACCACAGTCTTTGAACAAAGAAACGCTAGAGATCAGGACATCTGGTAATTTGTGTCTTACCTTTTCCACAACATCATGTGATGATGCATCATTCAGTCCTCCAATTGAGGCACCACAAGTCACTGTAGTTCCTCAGAAGAAGCACAATGTACATAACCATCTAGCAATCATATTAGGCATAGTTGGAGGAGCCACACTGGCCTTTATCTTGATGTGTATTTCGGTATTGATATACAAGACTAAACAGCAATATGAAGCCTCCCACACATCAAGGGCAGAAATGCATATGAGGAACTGGGGTGCTGCAAAAGTCTTTTCCTACAAAGAAATCAAAGTAGCTACAAGAAACTTCAAAGAAGTCATAGGAAGGGGCAGTTTTGGATCTGTTTATCTTGGAAAACTTCCAGATGGAAAATTGGTGGCTGTCAAAGTTCGGTTTGACAAATCTCAATTGGGTGCTGATTCTTTCATCAATGAGGTTAATCTTTTGTCAAAAATCCGGCATCAAAATCTTGTGTCTTTGGAAGGATTTTGTCATGAAAGAAAGCATCAGATATTGGTTTACGAGTACTTGCCAGGTGGATCCCTGGCTGATCACCTCTATGGTACAAACAATCAAAAAACTTCCTTAAGCTGGGTTCGAAGGTTGAAAATTGCCGTTGATGCAGCAAAAGGATTGGACTATTTGCACAATGGAAGTGAACCACGAATCATACACCGTGATGTCAAGTGCAGTAACATCCTCTTGGATATGGATATGAATGCCAAGGTCTGTGACTTAGGTCTCTCTAAGCAAGTAACTCAGGCAGATGCAACTCATGTCACCACTGTTGTCAAGGGCACTGCTGGTTACCTCGATCCAGAGTATTATTCCACTCAACAATTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCACTCTGGAACTCCTGATTCTTTCAATTTGGTGTTATGGGCCAAGCCATACTTGCAGGCTGGTGCATTTGAGATTGTGGATGAGGACATAAGAGGAAGCTTTGATCCCTTGAGTATGAGGAAGGCAGCTTTCATTGCTATAAAGTCAGTCGAGAGAGATGCATCACAGAGGCCATCTATTGCAGAGGTACTAGCAGAGCTAAAGGAAACCTACAATATTCAGCTCAGATTCCTTGAATCTTGTCAAAATGAGAACTGA 2715 0.4125 MDFRDAWAGFFLFCSFWLVTFCEQDGFLSLSCGGRTSFRDTSNISWVPDTSYITTGKTTTITYSDDSSALNISARFFLNSRRRKCYRIPVNNSTTLVLVRATFLYKNYDGLGKPPKFSASIGTAIAATINLAESDPWSEEFLWTVNKDTLSFCLNAIPKGGSPVISSLEIRPLPQGAYTNGMADFPNKLLRKSYRIDCGHSNGSIRYPLDPFDRIWDADRSFTPFHVATGFKIQLSFKQSSLEEKPPPAILQTGRVLARRNTLTYSLPLDALGDYYIILYFAGILPVFPSFDVLINGELVKSNYTINSSETSALYLTRKGIGSLNITLKSISFCPQINAFEVYKMVDVPSDASSTTVSALQVIQQSTGLDLGWQDDPCLPSPWEKIECEGSLIASLDLSDINLRSISPTFGDLLDLKTLDLHNTLLTGEIQNLDGLQHLEKLNLSFNQLTSIGADLQNLINLQILDLQNNNLMGVVPDSLGELEDLHLLNLENNKLQGPLPQSLNKETLEIRTSGNLCLTFSTTSCDDASFSPPIEAPQVTVVPQKKHNVHNHLAIILGIVGGATLAFILMCISVLIYKTKQQYEASHTSRAEMHMRNWGAAKVFSYKEIKVATRNFKEVIGRGSFGSVYLGKLPDGKLVAVKVRFDKSQLGADSFINEVNLLSKIRHQNLVSLEGFCHERKHQILVYEYLPGGSLADHLYGTNNQKTSLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMDMNAKVCDLGLSKQVTQADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLTHSGTPDSFNLVLWAKPYLQAGAFEIVDEDIRGSFDPLSMRKAAFIAIKSVERDASQRPSIAEVLAELKETYNIQLRFLESCQNEN 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00841 904 Pfam Leucine rich repeat 438 496 IPR001611 GO:0005515
Gma16g00841 904 Gene3D Ribonuclease Inhibitor 356 528 IPR032675 -
Gma16g00841 904 Gene3D Transferase(Phosphotransferase) domain 1 691 900 - -
Gma16g00841 904 SUPERFAMILY Protein kinase-like (PK-like) 594 886 IPR011009 -
Gma16g00841 904 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 899 - -
Gma16g00841 904 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Gma16g00841 904 SMART LRR_typ_2 459 482 IPR003591 -
Gma16g00841 904 SMART LRR_typ_2 436 458 IPR003591 -
Gma16g00841 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Gma16g00841 904 PANTHER OS07G0107800 PROTEIN-RELATED 10 899 - -
Gma16g00841 904 Gene3D Phosphorylase Kinase; domain 1 586 690 - -
Gma16g00841 904 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Gma16g00841 904 Pfam Protein kinase domain 617 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00841 904 ProSiteProfiles Protein kinase domain profile. 615 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00841 904 SUPERFAMILY L domain-like 358 506 - -
Gma16g00841 904 SMART serkin_6 615 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00841 904 Pfam Malectin-like domain 30 345 IPR024788 -
Gma16g00841 904 Coils Coil 897 904 - -
Gma16g00841 904 Gene3D - 192 347 - -
Gma16g00841 904 CDD STKc_IRAK 621 888 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00841 Gma-Chr16 15033534 15041036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00841 10 899 Receptor kinase-like Gene Family AT5G48740 62.472 0.0 1105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma16g00841 Malectin_like 9e-53 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00841 - - gmx:100812804 1757.65