Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00819 ATGGACAAAGCTGATGACTCTGGACTTGCTTCATATGTTGTCGGTCAAATTGATTGTACTCTTAGATGGAAGGATGTGAAGTGGCTTCAAACAATCACCAAACTGCCAATTCTGGTGAAGGGCGTGCTGACTGCTGAGGACACAAGGATAGCTGTACAAAGTGGTGCAACTGGAATTATAGTGTCCAATCACGGAGCTAGACATTTGTTTATGTGTTGGTGTGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTGTTACCTAGGCTTAATGAAATAAAATTTGGCAGTGGAGTAATTGATGAACTTTTGTTTCTGGACTTGCCACGTGAAACAAGACTTGAAGAGAGTGTATATGAGCCACTTCGTGTTGTTCGTGAAGGTCAACTTCACATCATATTCACTCAAGACTTGAAGATCTTATCATGGGAGTTCTGTGCAAGATGCCATGAAGAACTTCTTCCTCAAAGGTTGGTTGCACCACAAACTGATGATGCTGATTATGTGGAGCCATCATTTGCTGTTGGGAAATCTCCTAAAAATGTGAATGTTGCTTCTAATGACTTGTGGCTTTGGTCTAATGTATCTTCATCACCTTGTAGACAGGAGAATCGTTATTTCCCTGAACCTGTGTCATCATCGTCACCACTTGAGCTCCCTTGCACCGCCACTTCTTTCTTCTTCTTCGCATGTTTGGTCTCCTCGCATCTTCGTGTTTCAAGATTGGGAGGGTTTGGGTTCTTGAGATTAGGAGGGTTTTCATTTTTCTGTGTTTTGCAGAGTGGGGAGAACTCTTTGTACATCATGGTGGATCATACTTATGATGTTTTCATTGGTGCTAGTGGCATGGCACGAGATTGA 876 0.4235 MDKADDSGLASYVVGQIDCTLRWKDVKWLQTITKLPILVKGVLTAEDTRIAVQSGATGIIVSNHGARHLFMCWCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPRETRLEESVYEPLRVVREGQLHIIFTQDLKILSWEFCARCHEELLPQRLVAPQTDDADYVEPSFAVGKSPKNVNVASNDLWLWSNVSSSPCRQENRYFPEPVSSSSPLELPCTATSFFFFACLVSSHLRVSRLGGFGFLRLGGFSFFCVLQSGENSLYIMVDHTYDVFIGASGMARD 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00819 291 PANTHER LIM DOMAIN-BINDING PROTEIN 73 171 IPR029005 -
Gma16g00819 291 Gene3D Aldolase class I 1 98 IPR013785 -
Gma16g00819 291 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 73 171 - -
Gma16g00819 291 SUPERFAMILY FMN-linked oxidoreductases 12 94 - -
Gma16g00819 291 Pfam LIM-domain binding protein 72 179 IPR029005 -
Gma16g00819 291 ProSiteProfiles FMN-dependent alpha-hydroxy acid dehydrogenase domain profile. 1 69 IPR037396 -
Gma16g00819 291 Pfam FMN-dependent dehydrogenase 9 69 IPR000262 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00819 Gma-Chr16 13253782 13260683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00819 74 167 C2H2 Transcription Factor Family AT1G43850 57.944 4.06e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00819 - - gmx:547529 172.94