Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00806 atgtgcagatattgtggcttctcaaccctcctcatggatcccgcttcatatgtccaaactattgcaggaatcttagcattgttaattgcatacattttgtttaggtccgttaaatctcctaatggatctaaacaaagaaagggtaaccaagtacccgaacctcgtggtgctttaccTTTCATAGGTCATCTCCATCTTCTCAATGCTAGAAAACCGTATTTCAGGACCTTTTCGGCCATTGCTGAGAAATATGGTCCAATTTTCATTCTCAAATTGGGTTGCCACCCCACCTTAGTCGTGAATAGCAGGGAAATTGCCAAGGAGTGCCTCACAACTAATGACAAAGTTTTTGCCTCAAGGCCTATCACATCAGCAGGGAAAATCTTAGGTTACAACAATGCAGTTTTTGGTTTTTCCCCTTATGGGAAGTATTGGCGCGAAATTAGAAAAATGGCCATCCTTGAGATCCTCTCAAGCTATAAGCTTGAAAAGCTAAAGCATGTGAGAGACACTGAAACATTGTCTCTTGTCAAAGACCTGTACTCATCAATATCATGTCCAAAGAACGTGAATGGCTCAACAACTCACGTGCCTATAAGCAATTTATTGGAGCACATGTCCTTCAATATAATTGTGAGGATGATAGCTGGGAAGAGATTTGGAGGGGACACAGTTAATCAAGAAGACAATGAGGCATGGAGGCTAAGAAACGCTATCAAAGATGCCACATATCTATGTGGTGTTTTTGTGGCAGCTGATGCTATTCCATCCCTTAGTTGGATTGATTTCCAAGGGTATGTGAGTTTCATGAAGAGGACTAATAAGGAAATAGACCTTATTCTTGAGAAGTGGCTGGAAGAACATCTAAGAAAGAGAGGTGAGGAGAAGGACGGTAAATGTGAAAGCGACTTCATGGATGTGATGATATCTGCTTTCCAAGAGGAAGAAGAGATTTGTGGTTATAAGCGGGAGATGGTTATCAAAGCAACATCAGTGCTTCTTATCCTTACTGCCTCAGGAAGCACAGCCATAACACTAACATGGGCACTCTCCTTGCTCCTAAACCATCCAAAGGTCCTAAAAGCAGCCCAAAAAGAACTGGACACCCATTTAGGAAAAGAAAGATGGGTCCAAGAATCTGACATAGAAAACCTCACTTATCTACAAGCCATTATCAAAGAGACCCTTCGTTTGTACCCTCCAGCACCTTTAACTGGGATAAGGGAAGTTATGGAGGATTGTTGTGTGGCCGGGTACCATGTCCCAAAGGGAACACGTTTGCTTATTAACCTATGGAACTTGCAAAGGGATCCAAAAGTTTGGCCCAACCCTAATAAGTTTGAACCCGAGAGGTTCCTCACCACTCATCATGACATTAACTTTATGAGTCAAAACTTCGAGTTGATCCCATTTAGCATTGGAAGAAGGTCATGTCCTGGAATGACATTTGGGTTGCAAGTCTTGCACTTGACTCTGGCTCGATTGCTTCAAGGGTTTGATATTTGCACAAAGGATGGAGCTGAGGTTGATATGACTGAAGGGTTAGGAGTAGCTTTGCCTAAGGAACACGGACTTCAAGTTATGCTCCAACCACGTCTTCCATTGGGGCTTTATGAACGACTTTGA 1626 0.3807 MCRYCGFSTLLMDPASYVQTIAGILALLIAYILFRSVKSPNGSKQRKGNQVPEPRGALPFIGHLHLLNARKPYFRTFSAIAEKYGPIFILKLGCHPTLVVNSREIAKECLTTNDKVFASRPITSAGKILGYNNAVFGFSPYGKYWREIRKMAILEILSSYKLEKLKHVRDTETLSLVKDLYSSISCPKNVNGSTTHVPISNLLEHMSFNIIVRMIAGKRFGGDTVNQEDNEAWRLRNAIKDATYLCGVFVAADAIPSLSWIDFQGYVSFMKRTNKEIDLILEKWLEEHLRKRGEEKDGKCESDFMDVMISAFQEEEEICGYKREMVIKATSVLLILTASGSTAITLTWALSLLLNHPKVLKAAQKELDTHLGKERWVQESDIENLTYLQAIIKETLRLYPPAPLTGIREVMEDCCVAGYHVPKGTRLLINLWNLQRDPKVWPNPNKFEPERFLTTHHDINFMSQNFELIPFSIGRRSCPGMTFGLQVLHLTLARLLQGFDICTKDGAEVDMTEGLGVALPKEHGLQVMLQPRLPLGLYERL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00806 541 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 Gene3D Cytochrome P450 36 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 SUPERFAMILY Cytochrome P450 52 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 PANTHER CYTOCHROME P450 82C3-RELATED 20 539 - -
Gma16g00806 541 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g00806 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Gma16g00806 541 PANTHER CYTOCHROME P450 82G1 20 539 - -
Gma16g00806 541 Pfam Cytochrome P450 52 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00806 Gma-Chr16 12195428 12198748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00806 52 538 Cytochrome P450 AT4G31970 49.696 1.64e-170 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00806 K17961 - gmx:100806378 1063.52