Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00800 ATGTATAAGTGGAGCAAGGCTTTCTTATCAATGGAGTGTAGAAACGATTGGAGGAGATTTATTAGTTTTGGAGCACAAATCATTAGTTTTGTTCTTTATCTCCATACTTCTAATATCATCCACCGTGATGTCAAAACCAACAACATTCTACTTGACATTAGTGTTTCGACTAAGGTACCGGATTTTGGGCTTTCAAGATTGCTCCCCAATGATGTAAGCCATGTCTCCACAGCTCCACAAGGGTCTCTAGGGTATCTTGACCCTCAATATTTCCAATTGTACAGGTTCAAGGACAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTATTGAGCTGATATCATCCATGGTAGCAGATGATGCAGCCAGGGAAAGATATCAAGCTAACTTGGCAAATCTTACCATGAAAAAGATGCAAAAAGTAAAGCTTAGTGAGCTTGTAGACCCATTCTTTGGGTTTGAGTCAGACCAAGTAGTTAAAAGGATACTAACTTCAGTAGTAGGGTTGGCCTTTCGGTGTATGCAAGGAGACAATGAATTAAGTCCTTCTATGGATGAAGTTCTAGAAGCACTCAACAAATTTCAAAATGAGAATTATGAGTCTGAGAATCGAGAGAAAGAAGATAATGATGGTGTTATCTCTTCCACTTCATCCACTAAAGTACATCCACCCCAACCAGCTTCACAGGACTCGGGTCAAGTTGGAATTTTAATGAATAATAAGCTACTACGTTCACCGAATTCCTTGACTGAGAAACTGGAAGGGTGGTACGTGGATCTAGAACTGGCTACAAGAGTTAGAATCATGCATATATAG 816 0.3983 MYKWSKAFLSMECRNDWRRFISFGAQIISFVLYLHTSNIIHRDVKTNNILLDISVSTKVPDFGLSRLLPNDVSHVSTAPQGSLGYLDPQYFQLYRFKDKSDVYSFGVVLIELISSMVADDAARERYQANLANLTMKKMQKVKLSELVDPFFGFESDQVVKRILTSVVGLAFRCMQGDNELSPSMDEVLEALNKFQNENYESENREKEDNDGVISSTSSTKVHPPQPASQDSGQVGILMNNKLLRSPNSLTEKLEGWYVDLELATRVRIMHI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00800 271 SUPERFAMILY Protein kinase-like (PK-like) 11 195 IPR011009 -
Gma16g00800 271 SMART serkin_6 2 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00800 271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Gma16g00800 271 MobiDBLite consensus disorder prediction 212 234 - -
Gma16g00800 271 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00800 271 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 31 254 - -
Gma16g00800 271 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 31 254 IPR044652 -
Gma16g00800 271 MobiDBLite consensus disorder prediction 198 234 - -
Gma16g00800 271 Pfam Protein kinase domain 22 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00800 271 Gene3D Transferase(Phosphotransferase) domain 1 6 221 - -
Gma16g00800 271 Coils Coil 184 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00800 Gma-Chr16 11610141 11611600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00800 17 252 Receptor kinase-like Gene Family AT1G25390 44.492 1.70e-63 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma16g00800 Pkinase 6.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00800 - - gmx:113002205 363.229