Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00796 ATGGCCATCGACGCCTCCGCCATCGTCCTTATCCCTGACATCATGAAACCCTCCATCTGCCCAGACATTGTCAACTTCGTACACTCCAACATCTCCAAGAATAGTCGACAACCCTACGCCATCAACCGTCGTGCCGACCACCAGATCTTCGCTGAGTCTTGGGAAATTGGTCGTGCCATCTCTCCACCACTGGCACAGGAAAATCAACGTGAACCAGCAGCGTACGCCATTGCTGCCTCCTCCATCCCCTCCCTCGTCCTCGCCTACGGCCACTGCATTAAATCCGCCCTAGAGCTCCCACTCATCGTTAGTGACTCCATCAAAAGTGTCGAGAAAACAAAAGAAACAATCAAAGTCCTCAAGCATATCAGAGCATTCCCTAATGCAGAGAAAGCAAAAGACAACCACAACATTTGTGTGGAAACCGTTAAGGCAGATCTATCATCGAACAAAGTGAACAAACTTGACATCATCTTAGCTCTGCCGAAAAAAGAAGCTGTTGTCGCTGAAAAACCACCGGAGAAGAAGGTTGAAGAGAAGAAACCTAAGGAGAAAAAACCAAAAGAAAAACCTAAAGAGTCTGCTGTGACACTCCACCATGTCCTGGGTACCCACTCATTTGCTGTACAACATTCACAGATTCCACTAAGATTGAATTTAGCCATTCTTGATCCTGCGCTCATTGTTGTTTCCAAAAGTGCTCTTGTGCTCATTGTTGGAGACTCATTTGTGTTGAAACCTCCAACTCAGAAGGACTTGACAACAAGCTGA 771 0.4682 MAIDASAIVLIPDIMKPSICPDIVNFVHSNISKNSRQPYAINRRADHQIFAESWEIGRAISPPLAQENQREPAAYAIAASSIPSLVLAYGHCIKSALELPLIVSDSIKSVEKTKETIKVLKHIRAFPNAEKAKDNHNICVETVKADLSSNKVNKLDIILALPKKEAVVAEKPPEKKVEEKKPKEKKPKEKPKESAVTLHHVLGTHSFAVQHSQIPLRLNLAILDPALIVVSKSALVLIVGDSFVLKPPTQKDLTTS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00796 256 Gene3D - 71 171 IPR023574 GO:0003735|GO:0005840|GO:0006412
Gma16g00796 256 Gene3D - 3 70 IPR023574 GO:0003735|GO:0005840|GO:0006412
Gma16g00796 256 PANTHER 60S RIBOSOMAL PROTEIN L4 1 61 - -
Gma16g00796 256 PANTHER 60S RIBOSOMAL PROTEIN L4 69 140 - -
Gma16g00796 256 PANTHER 60S RIBOSOMAL PROTEIN L4 1 61 IPR045240 -
Gma16g00796 256 SUPERFAMILY Ribosomal protein L4 11 136 IPR023574 GO:0003735|GO:0005840|GO:0006412
Gma16g00796 256 MobiDBLite consensus disorder prediction 170 194 - -
Gma16g00796 256 PANTHER 60S RIBOSOMAL PROTEIN L4 69 140 IPR045240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00796 Gma-Chr16 11468095 11474645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00796 1 138 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 41.477 2.47e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00796 K02930 - gmx:100786828 158.303