Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00793 ATGGAAAGATATAAAATTTTGAGAGAGCTTGGGGATGGTTCTTGCGGTCATGTATATAAAGCCCGCGATATGAGAACATATGAGATTGTCGCTGTCAAAAGGTTGAAAAGAAAGTTTTATTTCTGGGAAGAATACACAAATTTAAGAGAAGTTATGGTCCTTCGTAAAATGAATCACTCAAATATCATAAAGTTGAAAGAGGTTGTTAGAGAAAATAATGAACTATTTTTCATTTTTGAATACATGGATTGTAATCTTTATCAATTAATAAAGGAGAGAGAAAAGCCCTTTTCAGAGGAAGAGATACGGTGCTTTATGAGGCAAGTGCTACAAGGACTTAGTCACATGCACAAGAAAGGATTCTTTCATCGGGATTTAAAACCTGAGAATTTGCTGGTAACAGATGATGTTTTGAAAATTGCTGATTTTGGACTGGCTAGAGAAGTATCATCGATGCCTCCATATACTCAGTATGTTTCCACACGGTGGTATCGAGCTCCAGAAGTTTTGTTGCGAGCCCCTTGTTATACTCCTGCTGTTGACATGTGGGCAGTTGGTGCCATATTAGCTGAGCTTTTTACTTTGACCCCTATATTTCCTGGTGAAAGTGAAATAGATCAACTGTACAAAATATACGGCATTCTTGGTATGCCAGATTCCACTGCTTTCACCATAGGGGAAAACAACTCTCAGTTATTGGACGTAGTTGCTCATGAAGTTGTTCCACCTGTGAAGCTTTCTAATATTATTGCGAATGCTAGTTTGGAAGCTATAGACTTGATCACACAACTGTTACATTGGGACCCATCAAGAAGGCCAGATGCAGATCAGTCATTGCAACATCCATTTTTCCAAGTGGATGCATGGGTTCCTTGTCCACTCAGTGATCCACTTGAGTTGAAGCTGAGTAGCAAGAGGGCTAAGCCAAATCTTGAGCTGAAATTGCAGGATTTTGGCCCTGATCCTGATGATTGTTTTCTTGGCTTGACTTTAGGTGTAAAGCCCAGTGTTTCAAACTTAGATGTGGTCCAAAATGTATCTCAGGGTGTCAGAGAGAATGTTCTATTTTGCTCAGATTTCAATGATCATTCAGACCAGTCAGTATTTTGGACATTATTATCTCCTGATCAAAATGGAGTTCATAACTCAGCCGAGACTTCGTTGTCATTGTCATTCAGTTCAGTACAACATCCGCCAATTGGAGTTCCAGAGTCTGCGGGATTTTCTTTTCAGCCTTTGCAGCCTAACATCTTAACCGCACCATTTTTGGCTCTCTCTTCTCCCTTCCAGCGCGAGCACTGCCTTTGA 1308 0.4021 MERYKILRELGDGSCGHVYKARDMRTYEIVAVKRLKRKFYFWEEYTNLREVMVLRKMNHSNIIKLKEVVRENNELFFIFEYMDCNLYQLIKEREKPFSEEEIRCFMRQVLQGLSHMHKKGFFHRDLKPENLLVTDDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLRAPCYTPAVDMWAVGAILAELFTLTPIFPGESEIDQLYKIYGILGMPDSTAFTIGENNSQLLDVVAHEVVPPVKLSNIIANASLEAIDLITQLLHWDPSRRPDADQSLQHPFFQVDAWVPCPLSDPLELKLSSKRAKPNLELKLQDFGPDPDDCFLGLTLGVKPSVSNLDVVQNVSQGVRENVLFCSDFNDHSDQSVFWTLLSPDQNGVHNSAETSLSLSFSSVQHPPIGVPESAGFSFQPLQPNILTAPFLALSSPFQREHCL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00793 435 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00793 435 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
Gma16g00793 435 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Gma16g00793 435 CDD STKc_MAK_like 4 284 - -
Gma16g00793 435 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00793 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Gma16g00793 435 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00793 435 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Gma16g00793 435 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 308 - -
Gma16g00793 435 PANTHER CYCLIN-DEPENDENT KINASE F-4 1 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00793 Gma-Chr16 11444758 11455957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00793 1 285 Core Cell Cycle Gene Families AT3G48750 37.500 1.11e-61 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Gma16g00793 Pkinase 2.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00793 K08829 K08830 gmx:100804781 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00783 03 28454402 28462999 Gma16g00793 16 11444758 11455957 GST