Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00787 ATGGAAGCTAACAGGATTCGGGAACTTAAGATACCTTTGCTGCAGGCTCCAGTAGACGGCGCCTTTAGGACCGTTACATTCCAGCTGAGTGACATCAAGTGTGCTTCCTGTGTGAATTCCGTCGAGTCCGTCGTTAGGAACCTTAACGGCGTCAAAAGCATCGACGTTTCGCCACTTGATGGAAGAGCCGCAATCAAGTTTGTTCCTAAGTTTGTTACTGCTAAACAAATAAAAGAAAGCATAGAGGAGAGTGGGTTTGGAGTAAAAGAGCTTCATGAGCAGGACATAGCAGTGTGCCGAGTGAGGATTAAAGGAATGGCGTGCACAAGCTGCTCCGAATCTGTTGTGAATGCCCTTCAAATGGTTGAAGGGGTGAAAAAAGCAATTGTTGGTCTCGCTTTGGAGGAGGCAAAAGTGCATTTTGATCCTAACCTCATCAATGCTGACAAGATAATTGAGGCCATAGAAGATGCTGGTTTTGGGGCTGATCTTATTAGCTCTGGGAATGATGCAAACAAAGTGCTTCTAAAGCTTGAAGGGGTTGATTCTGCAGAGGATGTAAATGCAGTAATGTCTTCTCTTGAATTAGCTGTGGGAGTGAACCATGTTGAGATGGATTTGTTAGAACATAAAGTTACTGGTAGTTATGATCCAGACATTACAGGTCCAAGGTATCTCATTCACTGTGTTCTGGACGCTAGCTGTGGCTCCAAGAAGTATGAAGCAACCTTGTACTCTCCTTCGGGGCAAAGAGAAAGGGATAAGGTGAATGAAATCCGTATGTATAGGGACCAATTTTTGTTCAGCTGCTTATTTTCTGTTCCTGTGTTTGTATTTGCTATGGTGCTTCCCATGCTTCCTCCTTATGGCAACTGGCTAAACTACAAGATCCACAATACGCTTACTCTTGGGTTGTTTTTAAGATGGATTCTTAGCACGCCTGTGCAGTTCATAGTTGGCAAAAGGTTCTATGTAGGTTCATATCATGCACTGAAGCGAAAATCCGCTAACATGGACGTGCTGACAAGTTCCATGATGATATCCTTTATTCTATTAGGGAAGTACTTGGAAATTGTGGCTAAAGGGAAAACATCAGATGCTTTAGGAAAGCTGACTCAACTTGTTCCTGATAAAGCTTATTTAGTAGCAATTGATACTGATGGAAATATCATGACAGAGACAGAAATTGACACTCAACTTATACAAAAAAATGACATAATTAAGATTGTTTATGGGTCCAAAATTCCTGTTGACAGTATAGTTATAAAAGGGCAAAGCTATGCCAATGAAAGTATGATCACTGGGGAGGCAAGACCTGTTGATAAAAGCCCAGGAGACAAGGTTATCAGTGGAACCATCAATGAGAATGGCTGCTTATTGGTTAAAGCCACACATGTTGGATCCGACACTGCACTTTCTCAAATAGTTCAACTCGTAGAAGCTGCTCAACTGGCCAAAGCACCAGTTCAACAACTTGCTGACCATATTTCAAGGGTTTTTGTTCCAATAGTGGTTGTTGCAGCTCTAATAACTTGGCTTGGATGGTTCATTCCCGGGGAAGCTGGTATTTACCCTAAACATTGGATACCAAAAGCAATGGATGCATTTGAGCTTGCTTTGCAGTTTGCTATTTCTGTGCTGGTTGTTGCTTGCCCATGTGCTCTGGGTCTTGCAACACCAACTGCAGTCATGGTTGCTTCAGGCATGGGTGCTTCTCAAGGTGTTCTGATCAAGGGTGGAGATGCACTGGAAAAGGCACACAAGGTAAAAATTGTTGTGTTTGATAAGACTGGGACACTAACAATTGGGAAGCCAGAGGTAGTTAGTGCAGTGCTGTTTTCTGAATTTTCTATGGAGGAATTATGTGACATGACAATTTATGTAGAGGCAAGTAGCGAGCACCCGATAGCAAAAGCTGTTGTGGCACATGCGAAGAGGCTGCGCCAGAAATTTGGTTCTTGCATTGAGGAAGTCCCAGATGTGGATGATTTTGAGGTACACATGGGAGCTGGTGTAAGTGGAAAAGTTGGTGATAGAACAGTTGTGGTTGGAAACAAGAGACTCATGCATGCTTGTAATGTTCCAATATGTTCCGAGGTTGAGAAGTACATCTCTGAAAATGAAATTCTGGCTAGAACTTGCATTTTAGTTTCAATTGATGGAAAGATTGCTGGTGCATTCTCTGTAACTGATCCTGTAAAACCAGAGGCTAAACGTGTCATATCTTTTCTCCATTCTATGGGCATCTCAAGCATCATAGTGACTGGTGATAACTGTGCTACTGCAACTGCTATTGCAAATGAAGTGGGTATTGATGAGGTCTTTGCTGAGACAGATCCTGTGGGCAAAGCTGATAAGGTGAAAGACTTGCAGATGAAAGGAATGACTGTGGCAATGGTAGGTGATGGAATAAACGACTCACCAGCCCTGGTTGCTGCTGATGTTGGCATGGCAATTGGTGCTGGAACTGACATAGCGATAGAAGCAGCTGACATAGTTCTTGTCAAAAGCAGTTTCGAAGATGTGATCACAGCCATAGACTTATCCAGAAAGACCATGTCGCGCATCCGGCTGAACTACATCTGGGCTCTTGGTTACAACATTCTTGGCCTGCCAATTGCGGCTGGAGTCTTATATCCCATTGCTGGAATCAGATTGCCCCCATGGCTTGCTGGTGCTTGCATGGCTGCTTCCTCTCTTAGCGTGGTTTCTTCGTCTCTTTTGCTGCAGTTCTATAAAAAACCTCTTCATATAGAATCCTCCTGA 2766 0.4338 MEANRIRELKIPLLQAPVDGAFRTVTFQLSDIKCASCVNSVESVVRNLNGVKSIDVSPLDGRAAIKFVPKFVTAKQIKESIEESGFGVKELHEQDIAVCRVRIKGMACTSCSESVVNALQMVEGVKKAIVGLALEEAKVHFDPNLINADKIIEAIEDAGFGADLISSGNDANKVLLKLEGVDSAEDVNAVMSSLELAVGVNHVEMDLLEHKVTGSYDPDITGPRYLIHCVLDASCGSKKYEATLYSPSGQRERDKVNEIRMYRDQFLFSCLFSVPVFVFAMVLPMLPPYGNWLNYKIHNTLTLGLFLRWILSTPVQFIVGKRFYVGSYHALKRKSANMDVLTSSMMISFILLGKYLEIVAKGKTSDALGKLTQLVPDKAYLVAIDTDGNIMTETEIDTQLIQKNDIIKIVYGSKIPVDSIVIKGQSYANESMITGEARPVDKSPGDKVISGTINENGCLLVKATHVGSDTALSQIVQLVEAAQLAKAPVQQLADHISRVFVPIVVVAALITWLGWFIPGEAGIYPKHWIPKAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGMGASQGVLIKGGDALEKAHKVKIVVFDKTGTLTIGKPEVVSAVLFSEFSMEELCDMTIYVEASSEHPIAKAVVAHAKRLRQKFGSCIEEVPDVDDFEVHMGAGVSGKVGDRTVVVGNKRLMHACNVPICSEVEKYISENEILARTCILVSIDGKIAGAFSVTDPVKPEAKRVISFLHSMGISSIIVTGDNCATATAIANEVGIDEVFAETDPVGKADKVKDLQMKGMTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLVKSSFEDVITAIDLSRKTMSRIRLNYIWALGYNILGLPIAAGVLYPIAGIRLPPWLAGACMAASSLSVVSSSLLLQFYKKPLHIESS 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00787 921 SUPERFAMILY HMA, heavy metal-associated domain 168 234 IPR036163 GO:0046872
Gma16g00787 921 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 339 909 IPR027256 GO:0006812|GO:0016021|GO:0019829
Gma16g00787 921 Gene3D - 20 89 - -
Gma16g00787 921 PANTHER ATP7, ISOFORM B 19 341 - -
Gma16g00787 921 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 342 918 - -
Gma16g00787 921 Pfam E1-E2 ATPase 378 571 - -
Gma16g00787 921 CDD P-type_ATPase_Cu-like 266 896 - -
Gma16g00787 921 Gene3D - 91 168 - -
Gma16g00787 921 ProSitePatterns E1-E2 ATPases phosphorylation site. 595 601 IPR018303 -
Gma16g00787 921 SUPERFAMILY HMA, heavy metal-associated domain 94 168 IPR036163 GO:0046872
Gma16g00787 921 Pfam Heavy-metal-associated domain 100 160 IPR006121 GO:0046872
Gma16g00787 921 Pfam Heavy-metal-associated domain 26 86 IPR006121 GO:0046872
Gma16g00787 921 Gene3D - 604 733 IPR023299 GO:0000166
Gma16g00787 921 CDD HMA 26 89 IPR006121 GO:0046872
Gma16g00787 921 SUPERFAMILY HMA, heavy metal-associated domain 19 93 IPR036163 GO:0046872
Gma16g00787 921 TIGRFAM TIGR00003: copper ion binding protein 25 88 IPR006122 GO:0005507
Gma16g00787 921 TIGRFAM TIGR00003: copper ion binding protein 101 161 IPR006122 GO:0005507
Gma16g00787 921 SUPERFAMILY HAD-like 591 906 IPR036412 -
Gma16g00787 921 PRINTS P-type cation-transporting ATPase superfamily signature 747 757 - -
Gma16g00787 921 PRINTS P-type cation-transporting ATPase superfamily signature 429 443 - -
Gma16g00787 921 PRINTS P-type cation-transporting ATPase superfamily signature 800 819 - -
Gma16g00787 921 PRINTS P-type cation-transporting ATPase superfamily signature 823 835 - -
Gma16g00787 921 PRINTS P-type cation-transporting ATPase superfamily signature 725 736 - -
Gma16g00787 921 PRINTS P-type cation-transporting ATPase superfamily signature 593 607 - -
Gma16g00787 921 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 19 341 - -
Gma16g00787 921 SFLD p-type atpase 575 852 IPR044492 -
Gma16g00787 921 CDD HMA 101 162 IPR006121 GO:0046872
Gma16g00787 921 SUPERFAMILY Calcium ATPase, transduction domain A 393 479 IPR008250 -
Gma16g00787 921 SUPERFAMILY Calcium ATPase, transmembrane domain M 341 585 IPR023298 -
Gma16g00787 921 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 346 877 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma16g00787 921 Gene3D - 361 483 - -
Gma16g00787 921 Gene3D - 584 850 IPR023214 -
Gma16g00787 921 SFLD C1.7: P-type atpase like 575 852 - -
Gma16g00787 921 Pfam haloacid dehalogenase-like hydrolase 589 814 - -
Gma16g00787 921 ProSiteProfiles Heavy-metal-associated domain profile. 98 164 IPR006121 GO:0046872
Gma16g00787 921 PANTHER ATP7, ISOFORM B 342 918 - -
Gma16g00787 921 ProSiteProfiles Heavy-metal-associated domain profile. 24 90 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00787 Gma-Chr16 11315876 11322440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00787 18 915 Primary Pumps ATPases AT1G63440 53.568 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00787 K17686 - gmx:100793894 1657.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00787 03 28549719 28561489 Gma16g00787 16 11315876 11322440 GST