Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00785 ATGGACGAGGATTTCGACATGGCGGCGGCGGAGCCCATGGGCGAGGACTTCGACTTCGCCGGCAGCGGCAGCAACCCCGTCCTGAAGGTCGGCGAGGAGAAGGAGATTGGGAAAGAGGGTTTGAAGAAGAAGCTCCTGAAAGAAGGTGAAGGATGGGACACCCCTGAAGCTGGTGACGAAGTTCAAGTTCACTATACTGGGACGTTGCTTGATGGCACGAAGTTTGACTCTAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAGGGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACAATGAAGAAAGGTGAAAATGCCCTTTTCACCATCCCAGCTGAGCTAGCTTATGGTGAATCTGGTTCTCCTCCAACAATCCCCCCCAATGCAACTCTTCAATTTGATGTGGAGCTGTTGTCTTGGACTAGTGTGAAGGACATATGTAAGGATGGAGGCTTATTTAAGAAGATACTTACCGAGGGAGAGAAATGGGAAAACCCCAAGGATCCTGATGAAGTTTTAGTGAAGTATGAAGCACATCTTGAGGATGGAACTCTTGTGGCTAAATCTGATGGAGTGGAGTTCACAGTCAACGATGGTCATTTTTGTCCTGCTTTTTCCAAGGCTGTTAAAACCATGAAGAAGGGAGAGAAAGTGCTTTTGACAGTGAAGCCACAATATGGATTTGGTGAGAAGGGTAAGCCAGCGCATGGTGATGAAGGTGCAGTTCCACCAAATGCAACTTTGCAGATTACTCTTGAGCTAGTTTCTTGGAAGACTGTGTCTGAAGTAACTGATGACAAGAAGGTCATTAAGAAGATCCTCAAGGAAGGGGAAGGATATGAGCATCCAAATGAGGGAGCCATTGTGAAATTGAAAGTAATTGGTAAACTGCAAGATGGTACTTTATTTTTGAAAAAGGGTCATGATGATGAAGGAGGGCTGTTTGAATTCAAAACTGATGAGGCAGAGCAAGTAATTGATGGGCTTGACAGAGCTGTGTTGACTATGAAGAAGGGTGAGGTAGCATTGTTGACTATAGCACCTGAATATGCTTTTGGTTCATCAGAGTCTCAACAGGAACTTGCAGTAGTTCCACCTAACTCCACATTATATTACGAGATTGAGCTAGTAtcatttgagaagGAGAAGGAGTCCTGGGACATGGACACACCAGAGAAGATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGAAATGCATTATTTAAAGCTGGTAAATATGCAAGAGCTTCTAAAAGATATGAGAAGGCTGTAAAGTTCATAGAGTACGATACTGCCTTTAGTGAAGAGGAGAAGAAGAGCTCCAAATCCTTGAAGGTTGCCTGTAATTTAAACAATGCAGCATGCAAGTTAAAATTAAAAGATTACAAACAAGCAGAGAAATTGTGCACAAAGGTACTGGACCTTGAGAGTACTAACGTGAAGGCTCTTTATAGACGGACCCAGGCATATATCCAGTTGGCTGATTTAGATTTGGCTGAATTTGATATTAAGAAAGCTCTTGAGCTTGAACCTAACAACAGGGATGTCAAGCTTGAGTACGTGACTCTGAAGGAAAAGATGAAGGAGTACAACAAGAAAGAGGCAAAATTTTATGGAAATATGTTCAACAAACTGCACAAGCTAGATTCTCTTGACAATAGTAAACCAGCGTCGAAGGATGCTCAGCCCATAAATATAGACAGCAAATCATAA 1728 0.4277 MDEDFDMAAAEPMGEDFDFAGSGSNPVLKVGEEKEIGKEGLKKKLLKEGEGWDTPEAGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQGQVIKGWDQGIITMKKGENALFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGLFKKILTEGEKWENPKDPDEVLVKYEAHLEDGTLVAKSDGVEFTVNDGHFCPAFSKAVKTMKKGEKVLLTVKPQYGFGEKGKPAHGDEGAVPPNATLQITLELVSWKTVSEVTDDKKVIKKILKEGEGYEHPNEGAIVKLKVIGKLQDGTLFLKKGHDDEGGLFEFKTDEAEQVIDGLDRAVLTMKKGEVALLTIAPEYAFGSSESQQELAVVPPNSTLYYEIELVSFEKEKESWDMDTPEKIEAAGKKKEEGNALFKAGKYARASKRYEKAVKFIEYDTAFSEEEKKSSKSLKVACNLNNAACKLKLKDYKQAEKLCTKVLDLESTNVKALYRRTQAYIQLADLDLAEFDIKKALELEPNNRDVKLEYVTLKEKMKEYNKKEAKFYGNMFNKLHKLDSLDNSKPASKDAQPINIDSKS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00785 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 54 143 IPR001179 GO:0003755
Gma16g00785 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 285 382 IPR001179 GO:0003755
Gma16g00785 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 169 260 IPR001179 GO:0003755
Gma16g00785 575 SUPERFAMILY FKBP-like 267 402 - -
Gma16g00785 575 SMART tpr_5 402 435 IPR019734 GO:0005515
Gma16g00785 575 SMART tpr_5 485 518 IPR019734 GO:0005515
Gma16g00785 575 SMART tpr_5 451 484 IPR019734 GO:0005515
Gma16g00785 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 291 385 IPR001179 GO:0003755
Gma16g00785 575 MobiDBLite consensus disorder prediction 1 25 - -
Gma16g00785 575 Gene3D - 150 263 IPR046357 GO:0003755
Gma16g00785 575 PANTHER PEPTIDYLPROLYL ISOMERASE 384 555 - -
Gma16g00785 575 PANTHER PEPTIDYLPROLYL ISOMERASE 272 384 - -
Gma16g00785 575 PANTHER PEPTIDYLPROLYL ISOMERASE 1 270 - -
Gma16g00785 575 SUPERFAMILY TPR-like 391 550 IPR011990 GO:0005515
Gma16g00785 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 174 263 IPR001179 GO:0003755
Gma16g00785 575 Gene3D Tetratricopeptide repeat domain 388 545 IPR011990 GO:0005515
Gma16g00785 575 MobiDBLite consensus disorder prediction 555 575 - -
Gma16g00785 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 272 384 - -
Gma16g00785 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 270 - -
Gma16g00785 575 Pfam Tetratricopeptide repeat 486 518 IPR019734 GO:0005515
Gma16g00785 575 Coils Coil 518 538 - -
Gma16g00785 575 SUPERFAMILY FKBP-like 149 266 - -
Gma16g00785 575 Gene3D - 30 149 IPR046357 GO:0003755
Gma16g00785 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 58 146 IPR001179 GO:0003755
Gma16g00785 575 SUPERFAMILY FKBP-like 34 150 - -
Gma16g00785 575 MobiDBLite consensus disorder prediction 560 575 - -
Gma16g00785 575 ProSiteProfiles TPR repeat profile. 485 518 IPR019734 GO:0005515
Gma16g00785 575 Gene3D - 264 386 IPR046357 GO:0003755
Gma16g00785 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 384 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00785 Gma-Chr16 11270489 11275413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00785 1 551 Calmodulin-binding Proteins AT3G25230 80.218 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00785 K09571 - gmx:100803189 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00789 03 28711165 28716630 Gma16g00785 16 11270489 11275413 GST