Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00784 ATGGGTATCTCCAGAGATTCTATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCATGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGCCAGCCTGCTAACACTAAGCTGTCAAGCAACAAGACAGTCAGGAGGATCCGGGTTAGAGGTGGAAATGTGAAGTGGAGGGCACTGAGATTGGATACTGGAAATTACTCCTGGGGAAGTGAAGCTGTAACTCGCAAGACTCGTATACTAGATGTGGTTTACAATGCCTCAAACAACGAGCTTGTGCGTACTCAGACTCTTGTAAAAAGTGCTATTGTTCAGGTTGATGCTGCTCCATTCAAACAGTGGTACCTTCAGCACTATGGTGTTGAGATTGGTAGGAAGAAGAAGACAGCTGCCAAGAAGGAAACTGCAGAGGAGGGTGCTGCTGCTGTTGCTGTGGAAGAAGCCAAAAAGAGTAATCATCTGCAGAGAAAATTGGAGAAGCGCCAGAAAGATCGTAAGCTTGATGCTCACATTGAGGAGCAGTTTGGTGGTGGGCGTTTGCTTGCTTGCATTTCCTCTCGGCCTGGTCAATGTGGCAGAGCTGACGGCTACATTTTGGAAGGTAAGGAGTTGGAGTTTTACATGAAAAAACTCCAGAAAAAGAAGGGAAAGGGTGCTGCTTGA 660 0.4742 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAKKETAEEGAAAVAVEEAKKSNHLQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00784 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 219 - -
Gma16g00784 219 Pfam Ribosomal protein S8e 5 198 IPR022309 -
Gma16g00784 219 Gene3D Ribosomal protein S8e, subdomain 109 177 IPR042563 -
Gma16g00784 219 MobiDBLite consensus disorder prediction 1 41 - -
Gma16g00784 219 Gene3D - 26 214 - -
Gma16g00784 219 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Gma16g00784 219 MobiDBLite consensus disorder prediction 11 26 - -
Gma16g00784 219 TIGRFAM eS8: ribosomal protein eS8 1 200 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gma16g00784 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 219 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gma16g00784 219 CDD Ribosomal_S8e_like 5 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00784 Gma-Chr16 11198100 11200643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00784 1 207 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.058 3.31e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00784 K02995 - gmx:100527664 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00791 03 28752411 28755515 Gma16g00784 16 11198100 11200643 GST