Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00778 ATGTTGCATAAGAAGAAGAATGGCAGCGAAAACGGCAACAACAAGGAGAATGAAGACACCACCATCACCAATGTCTTGAAGGTCGAAGCACACTACGAAGGACTTGTCATTTTCTCTATATCTATCATCTCACCATTATTGCCTCAATTTCATACTTTCTTTCATGATCACAGTTTAGGGACTGCAGATTCTCTGTTTCTGTACACATGGAGTCAGTGTCGCGTGCTAATTTCTTTTCATTCGAAAGATTCTGGCTACCGTTTCAGAAAGCTTTGTGGCATAGAAAGCTTTTATTTTGATGATAAGTTTAGATATCCTGAGAATTCTGCTCCTGGTCAACTCCCAAGAACAGTGGATGTAATTGCAGAAGTCGAAAACAAAGAGGCTAATGCACCAATGTACAGTGCTGAAGATGTCAAAAACATTAAAGAGATAGCTGCAAGAGATGATGAATTTGATTTGCTAAGTAATTCACTTGCACCTTCTATATATGGGCATTCTTGGATAAAGAAAGCAGTGGTTTTGTTGATGCTTAGTGGGGTGGAGAAGAATTTAAAGAATGGCACTCACTTGCGAGGGTTAGAGTTTTCTCTTGATCTCCTTTCTGTTTCATCGTATTTGAGTATTTTAGATTTTGATATTCCTTTTCCCATACTATCTTTGACCCTGTCACCACTGAGCTACAGTTTACTCAATCCCACAGAATTTTTAGGAAACATTGTGGTTGAACATGATTATGCTGAGTGCACTGGATCTGCTATTCAAGCTTTAGTTTTGTTTAAGAAGCTATATCCAAGGCATAGGGAGACAGAGATAAAGAATTCCATTGCCAATGCAGTTCATGGTATGGAAGTTGGGGAGTTTGCTACATTTATGGCACTTGGTTTGCACTTCGTGGTCTTGCAGTGGCGAGTAAAACTTACACTAATTGTGCTGCCATTCGCAAAGCCATTAAATTTCTACTTTCAACACTGA 975 0.3908 MLHKKKNGSENGNNKENEDTTITNVLKVEAHYEGLVIFSISIISPLLPQFHTFFHDHSLGTADSLFLYTWSQCRVLISFHSKDSGYRFRKLCGIESFYFDDKFRYPENSAPGQLPRTVDVIAEVENKEANAPMYSAEDVKNIKEIAARDDEFDLLSNSLAPSIYGHSWIKKAVVLLMLSGVEKNLKNGTHLRGLEFSLDLLSVSSYLSILDFDIPFPILSLTLSPLSYSLLNPTEFLGNIVVEHDYAECTGSAIQALVLFKKLYPRHRETEIKNSIANAVHGMEVGEFATFMALGLHFVVLQWRVKLTLIVLPFAKPLNFYFQH 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00778 324 Gene3D - 133 194 IPR027417 -
Gma16g00778 324 Pfam MCM P-loop domain 138 193 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma16g00778 324 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 126 193 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma16g00778 324 PANTHER DNA REPLICATION LICENSING FACTOR MCM3 HOMOLOG 3 126 193 - -
Gma16g00778 324 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 195 280 IPR008930 -
Gma16g00778 324 ProSiteProfiles MCM family domain profile. 151 193 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma16g00778 324 SMART mcm 55 302 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00778 Gma-Chr16 11135349 11138344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00778 106 193 Core DNA Replication Machinery Family AT5G46280 53.788 9.13e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00778 K02541 - gsj:114389851 177.178