Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00765 atgaattatccaaagggagaggaactaaacgaaggattattacgaaccatagaaggatgtcggatatgtgtagttgttttctccacaaactaccctgcgtcttcttggtgtcttaaagagttggaaaaaatcattgaatgccacagaacttatggccacatagttttgcccatattttacgatgttgatccctcccatatacgtcatcagcggggtgcttttgggaaaaatttgaaagcatttcaaggattgtggggaaaatctgtgttgtcgaggtggcgcacggtactcaccgaagctgcaaacttctcgggttgggatgtgagcaataacaggaacgaggctcaattagtgaaggaaattgctgaagatgttctcacaaaactagacaacacattcatgcatatgactgaatttcctgttggattagaatcccatgtgcaagaagtgattggatatattgaaaatcagtcaaccaaagtttgtatcgtagggatatggggaatgggaggattgggtaaaactaccacagccaaagccatctacaatcgaattcatcgtagattcatgggtagatgtttcattgaagatattcgagaagtttgtgaaacagatagaagagggcatcttcatttgcaagaacaacttctttcaaatgtccttaaaacaaaggtgaacatacaaagcgttgggataggaagagctatgattgagagcaaactttctagaagaaaggcactcattgtacttgatgatgttattgagtttggccagttaaaagtcctatgcggaaatcgtaaatggtttggtcaaggaagtatagtaatcattacaactagagatgtacgcctacttcacaaacttaaagttgattttgtttataaaatggaggaaatggacgaaaataagtcccttgagctttttagttggcatgcttttggagaagcaaaaccaacagaagagttcgatgaacttgcaagaaatgtagttgcttattgtggaggactaccgctagctcttgaagtcattggttcttatttaagtgagaggaggaagaaagagtgggaaagtgtattgtcaaaactaaaaataattcccaatgatcaagttcaagagaaattaaggataagctataatggcttaggtgatcacatggaaaaggatatatttcttgatatttgttgtttctttattggtaaagatagagcctatgttacagagatactaaatggctgtggactacatgctgatattggaataacagttctcatggagcgtagcctcgtaaaagttgcaaagaacaacaaacttgaaatgcatccattaatacgagacatggatagagagataattcgtgaaagttcaacaaagaaacctgggaagcgcagtcgattgtggtttcaagaggattcacttaatgtattgacaaagaatactgggacaaaagctattgagggattggctctgaaattgcattcaagcagcagagattgcttcaaagcttatgcttttaagacaatggatcaattgagactattgcaacttgagcatgtagaactcactggagattatgggtatcttcctaagcatctgagatggatctattggaaaagatttcctttaaaatacatgcctaaaaacttttttcttggaggtgtaattgcgattgatttaaaacacagcaatcttagactagtctggaaagaaccccaggttttgccgtggctgaaaatcctcaatcttagtcattctaagtacttgacagaaacccctgacttttcaaatttaccaagtcttgaaaagctcattctcaaagattgtccaaaagcatatctgagggattggcaaccagtgcgCAGCGACGGTGGCGCCGTCGTGCACTTTGTTGTCGTACAGGTACCACTTCAAAAAAAGGAAGGGTCTGAAGTGAGGGATTTCGGGTTCGGGTGCTGTCGGAAGGAAGTGTGCGTGGATTCGTTGGTGGAGATGATCACATTTGTTCATTGGAGCAATTGCTCGAACATGATGTCAGAGCTTTGTGAGATGCAGAAGTGGAGAGATAAGAGCCGTGTGAGGCGAGTGATGATGAGAAGCGAAGTGTTGTTACTGCCATGGACTAATCAAACAAAGCTTTGTATTGTTGCATACTTTGTGGGAGTTCAAATAGAAGACAACAATAAAAATGATGATAGTCATTGTTTGAGTCCTGAGAAGAGACAACTTAGTGTGCAAAAGGATCATGTGAGTTTGGAAACCCCATGGATTTTGACTCCAAGGATCGAGGGTAACTTGAATTGGATGCATTTGGAAATCCAAAGGGATTAG 2325 0.0899 MNYPKGEELNEGLLRTIEGCRICVVVFSTNYPASSWCLKELEKIIECHRTYGHIVLPIFYDVDPSHIRHQRGAFGKNLKAFQGLWGKSVLSRWRTVLTEAANFSGWDVSNNRNEAQLVKEIAEDVLTKLDNTFMHMTEFPVGLESHVQEVIGYIENQSTKVCIVGIWGMGGLGKTTTAKAIYNRIHRRFMGRCFIEDIREVCETDRRGHLHLQEQLLSNVLKTKVNIQSVGIGRAMIESKLSRRKALIVLDDVIEFGQLKVLCGNRKWFGQGSIVIITTRDVRLLHKLKVDFVYKMEEMDENKSLELFSWHAFGEAKPTEEFDELARNVVAYCGGLPLALEVIGSYLSERRKKEWESVLSKLKIIPNDQVQEKLRISYNGLGDHMEKDIFLDICCFFIGKDRAYVTEILNGCGLHADIGITVLMERSLVKVAKNNKLEMHPLIRDMDREIIRESSTKKPGKRSRLWFQEDSLNVLTKNTGTKAIEGLALKLHSSSRDCFKAYAFKTMDQLRLLQLEHVELTGDYGYLPKHLRWIYWKRFPLKYMPKNFFLGGVIAIDLKHSNLRLVWKEPQVLPWLKILNLSHSKYLTETPDFSNLPSLEKLILKDCPKAYLRDWQPVRSDGGAVVHFVVVQVPLQKKEGSEVRDFGFGCCRKEVCVDSLVEMITFVHWSNCSNMMSELCEMQKWRDKSRVRRVMMRSEVLLLPWTNQTKLCIVAYFVGVQIEDNNKNDDSHCLSPEKRQLSVQKDHVSLETPWILTPRIEGNLNWMHLEIQRD 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00765 774 Gene3D Ribonuclease Inhibitor 456 618 IPR032675 -
Gma16g00765 774 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 106 IPR035897 -
Gma16g00765 774 Pfam NB-ARC domain 144 365 IPR002182 GO:0043531
Gma16g00765 774 Gene3D - 298 382 IPR042197 -
Gma16g00765 774 SUPERFAMILY "Winged helix" DNA-binding domain 369 475 IPR036390 -
Gma16g00765 774 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 393 IPR027417 -
Gma16g00765 774 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 608 - -
Gma16g00765 774 SMART till_3 2 103 IPR000157 GO:0007165
Gma16g00765 774 PRINTS Disease resistance protein signature 240 254 - -
Gma16g00765 774 PRINTS Disease resistance protein signature 333 347 - -
Gma16g00765 774 PRINTS Disease resistance protein signature 571 587 - -
Gma16g00765 774 PRINTS Disease resistance protein signature 163 178 - -
Gma16g00765 774 SUPERFAMILY L domain-like 492 607 - -
Gma16g00765 774 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 608 IPR044974 GO:0006952
Gma16g00765 774 Pfam TIR domain 5 134 IPR000157 GO:0007165
Gma16g00765 774 Gene3D - 129 293 IPR027417 -
Gma16g00765 774 Gene3D - 1 128 IPR035897 -
Gma16g00765 774 ProSiteProfiles TIR domain profile. 1 129 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00765 Gma-Chr16 10591489 10600349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00765 7 607 WRKY Transcription Factor Family AT4G12020 29.469 6.38e-76 267