Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00763 ATGTTGGCATTCCTCAAGTGCCTCATTGCCGCGCAGCCCGACGCCGCCGACTGGAAGTTCCTCACGGCACGCCTCACTGCGGAGACAGGTGACTCGGACTCCACGCGCGACTACTACAAGGAGGTCCTCATCGTGAACCCTCTCTCTTTTGAGGCGCTTTTCGAGAATGCACTGCCGATGGACCAGTGCGGCGAGGGGGAGGCTGCGATGCGGCGCCTCGAGGAGGCATTGCACATGGCGGCGGAGGAGAAGATGGTGAAGGAGGTCAGAGACGTAAAGCTCATCATGGTGCAGATCATGTTTCTTCAGAAAAATGTGGATGAAGCGTTAATGATTTATAATCAGCTCACGAAAGAGGATCCTAGGGATTTCAGGCCTTATTTTTGTAGAGGCATGATTTATATCTTGCTTGATAGGAATGAAGAAGTCAAGACTTTAGCAACTGTTGATTTTGAGGATTCCAACCGGGTTCTTATTAGGCCACATCCTGCAATTTGGCGCTTGGTTCATGGAATGGTTGTTGCTTACCTTGTTGCCCTCACATTTTTGCTTTTTCAGCAATCGGATTCGAGAGCTACTTTAATGGCTCGATCCTATCTCCCAAGCAAGGTCTTTGTGGCAGAGAAAAGATCTCAGAGCAAGCTGAAGCATATGGAGATGGAGTGTGAGTACTTAAAGAGGTGGTTTGGTTCCCTCACAGTAGAGCAAAATCGGAGGCCCACCCACCGTGATCTCCCATCACTCCTACGAGCCGCTCCCTCCTCCACACTTTCCATGTGTCCCCGCTACGAGCATGTCACCTCCACCGCCGACAAACCACTCGCCGCCGCCGCCATATAG 840 0.5167 MLAFLKCLIAAQPDAADWKFLTARLTAETGDSDSTRDYYKEVLIVNPLSFEALFENALPMDQCGEGEAAMRRLEEALHMAAEEKMVKEVRDVKLIMVQIMFLQKNVDEALMIYNQLTKEDPRDFRPYFCRGMIYILLDRNEEVKTLATVDFEDSNRVLIRPHPAIWRLVHGMVVAYLVALTFLLFQQSDSRATLMARSYLPSKVFVAEKRSQSKLKHMEMECEYLKRWFGSLTVEQNRRPTHRDLPSLLRAAPSSTLSMCPRYEHVTSTADKPLAAAAI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00763 279 Pfam Phosphatidyl serine synthase 161 201 IPR004277 GO:0006659|GO:0106245
Gma16g00763 279 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 2 145 - -
Gma16g00763 279 SUPERFAMILY TPR-like 4 142 IPR011990 GO:0005515
Gma16g00763 279 PANTHER PROTEIN SLOW GREEN 1, CHLOROPLASTIC 2 145 - -
Gma16g00763 279 Coils Coil 99 119 - -
Gma16g00763 279 Gene3D Tetratricopeptide repeat domain 1 148 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00763 Gma-Chr16 10574073 10576061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00763 186 271 Homeobox Transcription Factor Family AT1G70920 50.000 1.24e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00763 - - gmx:100780000 245.358