Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00752 ATGCTTCGGTTTCTCCCAACTGAGTCAAACATTTTCCAGTCTTTTCCACACTTCGCAGTTGTAAAAGCTCTGCGAGTGTTCACTTCCGCCACCTGTTCGACCATTGGCCTCACCCAAACCCAGGTTGAATTTGAAGATGATAAAAACAAGTGTAGTGATGCTGCTGAGCTTTTGAGCAAATGGGGTTGTAGTGATGATGATTTGGTGAGAATATTCTCACGTTGCCCCTCCTTGCGCAATGCTGATCCCATGCAGGTTCAGTCTAAACTGTGCCTGCTGAGTGATTTGGGCTTGTGTGCATCTGAACTTGTAAAGATTGTCAATTGTAGGCCACGGTTTTTCCGGTCTCGGATTAATAGTTGCTTAGAAGAGAGGATGGCGCATCTTACATCATTGTTTGAGACGAAAGAAGTGCTTCAGAAGGCAATTGTGAGGAACCCTTCGTTGCTGCTATCTGCGGGTCGCTATAATGTGAAGGCAACAGTTGAGCTCTATGAGAAGTTGGGTGTTAAGAAAGAGGACTTGATTCAGATGCTCCTTTTGCGGCCCACGGTTATTTCGAGGACTTCCTTTGATGCTGAGAAGCTGGAATATTTAAGCAAGACTGGGCTTACTAAGGATTCCAAGATGTATAAATATGTGGTGACATTAATAGGAGTCTCTCGCGTGGAAACGATTCGGGATAAGGTGGCAAATTTCGTGAAATTTGGGTTTTCCGAAGAGGAGATATTTGGTCTTGTGGGGAAGTCTCCTAATGTGTTGACATTGTCAACGGAAAAGGTTCAGAGGAACATGACTTTCATTTTGGGAACGATGAAGCTTGATGCTAAGATGGTTCTAAAGCTGCCGTATCTCTTATATGCCAATGTGGATACTGTTTTGAAGCCAAGAGTGCTTCTAGCATTGAAGATGCAAGATATGGATGCAGAGTTGCAAATCATGGGACCAACGATCGTAAGCTCACTGAGGATGCCAGAGCAGAGATTTTTAAAGTTGTTTATCCAATGCCATGACGAGGATGTTGCAAATCAATTGATGGAATTCTATAAAAGGACAAAAGAGGTGAAGAGATTAGGAGAGTCATCAAAGAAGTACAGGTGCTCACATGCTAAAAAGTTTTGGTTTGAGGCATCCTTGCTTCGCCAAGTGATTGATATTGTAGCAACAGTCCATGACATGAAAGACTTCATTTTTGCTAGTCCTCAACAATTCTCTCAAACCCAGGTGCCTACTGGATTCAAGGTCCAACACCTCCAAAAGGAATTTAAGAAGGAAGAAGAAGCAAAGAAAGGAAAGACAATTGCAATTCAAGCAAGATTGTATTGCACTGCTCTCTGGGTTGTCCTTTTCCTTTTGGGTTTGTTTGCTACTTGCACCCCATTTTCTGCTTCTGTGTTCATTGCCGGAGTCATTTCCTTTGCTGCCCCTATATCAGTCATGTACCCTCAGCTACTATTTGCAATTTCTATGTATTAA 1476 0.4282 MLRFLPTESNIFQSFPHFAVVKALRVFTSATCSTIGLTQTQVEFEDDKNKCSDAAELLSKWGCSDDDLVRIFSRCPSLRNADPMQVQSKLCLLSDLGLCASELVKIVNCRPRFFRSRINSCLEERMAHLTSLFETKEVLQKAIVRNPSLLLSAGRYNVKATVELYEKLGVKKEDLIQMLLLRPTVISRTSFDAEKLEYLSKTGLTKDSKMYKYVVTLIGVSRVETIRDKVANFVKFGFSEEEIFGLVGKSPNVLTLSTEKVQRNMTFILGTMKLDAKMVLKLPYLLYANVDTVLKPRVLLALKMQDMDAELQIMGPTIVSSLRMPEQRFLKLFIQCHDEDVANQLMEFYKRTKEVKRLGESSKKYRCSHAKKFWFEASLLRQVIDIVATVHDMKDFIFASPQQFSQTQVPTGFKVQHLQKEFKKEEEAKKGKTIAIQARLYCTALWVVLFLLGLFATCTPFSASVFIAGVISFAAPISVMYPQLLFAISMY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00752 491 PANTHER CGI-12 PROTEIN-RELATED 16 368 IPR003690 GO:0003690|GO:0006355
Gma16g00752 491 Gene3D Transcription termination factor 3, mitochondrial 135 345 IPR038538 -
Gma16g00752 491 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 368 - -
Gma16g00752 491 Pfam mTERF 110 329 IPR003690 GO:0003690|GO:0006355
Gma16g00752 491 Pfam mTERF 50 152 IPR003690 GO:0003690|GO:0006355
Gma16g00752 491 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Gma16g00752 491 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Gma16g00752 491 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Gma16g00752 491 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Gma16g00752 491 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Gma16g00752 491 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma16g00752 mTERF 5.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00752 K15032 - gmx:100799629 708.753