Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00742 ATGAGCGTCTATAGAGTGAAGAAAGAGTGCTTGGGAAGTGGGACCCACTCAAAAGAGAGAGTGAAGATCATGGCCTCATCTAGCTACTCTAACTCTCCCTATGATGCCTGCAAGTTCTTGAGAAGAAAATGCATGCTGGATTGCATTTTCTCCCCGTATTTCCCTCCAAAAGAGCCTCAAAAGTTCACCAATACTTGGAAGAGTAAAGAGGTTGAAGAATCACCTAGTGCAATAGGTGGCTTAAGGAATCCTCAGGAGAGCTTAGGTTGA 270 0.4444 MSVYRVKKECLGSGTHSKERVKIMASSSYSNSPYDACKFLRRKCMLDCIFSPYFPPKEPQKFTNTWKSKEVEESPSAIGGLRNPQESLG 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00742 89 Pfam Lateral organ boundaries (LOB) domain 35 65 IPR004883 -
Gma16g00742 89 MobiDBLite consensus disorder prediction 57 89 - -
Gma16g00742 89 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 24 67 - -
Gma16g00742 89 ProSiteProfiles LOB domain profile. 32 89 IPR004883 -
Gma16g00742 89 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 24 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00742 Gma-Chr16 9743641 9748281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00742 21 67 AS2 family AT3G27650 59.574 2.19e-16 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma16g00742 LOB 5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00742 - - var:108328620 85.8853