Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00737 ATGTTTTTGGTCCAGGACTGCACCTCTGACTCTACTTGGATCATCGTCCATGGACATGTCTACGACAACACCTGCTTGCTCAAAGAGCACCTCTGTGGCATCGATAGCATCCTCATAAATGTCGGCATCGACTGCACTGAAGAGTTTGACGCCATTCATTCTGACAAACTAAGGAAATTGCTCGAAGATTTTCGAATTGGCGAGCTCATCACAAGTAATATACATAGGTTGCAGATTAGCGGTGTGGCGTTTAGGGCTTCAATTCCGAGCAGTGTGAGGATGACGATCCAGAACATCAAGGAGATCACGGGCAATCACAGTGAAGAAGACGTTTATGCAATGCTCAAGGAATGTTCCATGGATCCCAACGAGATTACTCAAAAGCTTCTCCTTCAGGGTGACTATCACTGCTTTGATTTGATGGTTGTCTGCTATTCCTTGCTATCTACATATGCTTTCATGATTTTGCATATTCTCTACAGTGGTGAGAAAACCTATGGTTCAACAACTTTTGCTGTGAATTCACCTTATTTCCTTGCCAAGAACATCACATTCCAAaacacaactcctgttcctGCACCAGGAGTAGTTGGAAAGCAAGCGGTGGCATTAAGGATTTCAGCAGACACAACAACATTTGTAGGCTACAAATTCTTAGGAGCACAAGACACAATTTATGATCATTTGGGAAAACATTTTTATAAGGATTGTTACATCGAAGGCTCTGTTGATTTCATATTTGGCAACTCTCTCTCACTATTTGAGGGATGTCACGTGCATGCCATTGCACAGATTATAGGGGTCGTAACAGCTCAAGGAAGGAGTAGTATGTTGGAGGACACGGGGTTCTCAGTTGTGAACTCCAAGGTCACGGGATCAAGGGCACTATACCTTGGAAGGGCTTGGGGACCCTTTTCTCGCGTGGTCTTTGCCTACACATATATGGAAAACATCATCATTCCCAAAGGCTGGTATAACTGGGGTGATCCTAACCGTGAAATGTATGGCTCTTCCTCTGTTCTTCTTCTACCACATAGAGAAATTCATTCATTTTAG 1056 0.428 MFLVQDCTSDSTWIIVHGHVYDNTCLLKEHLCGIDSILINVGIDCTEEFDAIHSDKLRKLLEDFRIGELITSNIHRLQISGVAFRASIPSSVRMTIQNIKEITGNHSEEDVYAMLKECSMDPNEITQKLLLQGDYHCFDLMVVCYSLLSTYAFMILHILYSGEKTYGSTTFAVNSPYFLAKNITFQNTTPVPAPGVVGKQAVALRISADTTTFVGYKFLGAQDTIYDHLGKHFYKDCYIEGSVDFIFGNSLSLFEGCHVHAIAQIIGVVTAQGRSSMLEDTGFSVVNSKVTGSRALYLGRAWGPFSRVVFAYTYMENIIIPKGWYNWGDPNREMYGSSSVLLLPHREIHSF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00737 351 PRINTS Cytochrome B5 signature 20 30 IPR001199 -
Gma16g00737 351 PRINTS Cytochrome B5 signature 45 52 IPR001199 -
Gma16g00737 351 PRINTS Cytochrome B5 signature 57 69 IPR001199 -
Gma16g00737 351 PRINTS Cytochrome B5 signature 30 44 IPR001199 -
Gma16g00737 351 Pfam GBF-interacting protein 1 N-terminal 88 136 IPR009719 -
Gma16g00737 351 Pfam Pectinesterase 161 329 IPR000070 GO:0030599|GO:0042545
Gma16g00737 351 SUPERFAMILY Pectin lyase-like 160 332 IPR011050 -
Gma16g00737 351 SMART Cyt_b5_2 2 70 IPR001199 -
Gma16g00737 351 Pfam Cytochrome b5-like Heme/Steroid binding domain 7 69 IPR001199 -
Gma16g00737 351 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 164 334 - -
Gma16g00737 351 Gene3D - 156 341 IPR012334 -
Gma16g00737 351 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Gma16g00737 351 Gene3D - 3 77 IPR036400 -
Gma16g00737 351 SUPERFAMILY UBA-like 86 133 IPR009060 GO:0005515
Gma16g00737 351 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 7 74 IPR036400 -
Gma16g00737 351 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 1 70 IPR001199 -
Gma16g00737 351 PANTHER PECTINESTERASE 164 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00737 Gma-Chr16 9579211 9585204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00737 95 333 Carbohydrate Esterase AT1G05310 40.873 8.82e-59 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00737 K01051 - gmx:106796378 373.629