Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00716 ATGAGGGCAGTTGAAGAAAAACAGTGGCAAAATTTGGAGATGATGAAGCAAGAGTTAAAAAAATCACTGAAAGTAGAGCTATCTCATATTGCATCACATCAGTCAGCCCCCATTGAGGCGCCAGAAATACAAGCTCTACTTATGCGTGTTAGCACAAAGGGTAGCTGCGCTGGACCTGAAGGAAGCAGATTACTTAAAGAGCTTTTGAATGGTGATGACGATCTGATGGGCTTGTTCGTGGTCGTAGGACCCGATAAGCCTCCATCAAAGTCTATTGGAGAACCGAACAGGTTAACATCTGTGGCCATAGATGGCCCACTGGGAGAATTGGTTAAGAAGTCATATGTGGTTTACACAAAGCCAATGGAGTTGGCATGGGATGGGGCGAAATTTGGGTTACCTAATGCCACAAATGTAATCTCCAAGGCAAGGACAATGCACCTCCACCTCCACCTCAATGGATTGAGGCTAAGGTCAGCGTTTGACATGTTCCTGCTTGGGTCGTTCAGTCCGTCGCAACCTTCTCATACATTGGTGCAAGAAATCATCGGAAAAGCTCCTCAGAGCTTTCTGGATGGAGATGATGCTTATAGGAACTCAAGATTTAAGCTCATACCATATATTTGTAAGATTGATATCGACGTTGGATCTTCAACCGTGGCAAGCGGGGTGCCTAGCCTAGTTCTTGGATACCTGAACAATTTGGTGGTAGAAATGGCATTTTTGGTACAGAACTGTTTGCAACCAGGGACACTGTGGTGCCCCAAGACCATCCCTAACTCTAACTCCAATGACCTATCGTTCCAAAACAATAGAAGAGAAAAAACTTTCAAGGAAACCACAGTGGACTCTATTTCATATCGGAGGCAATACCTCAAAGAGAAGGGCAGCTTTGGAGACCTTACCCTCGGGATTGCATTGGCATGCACCAATGGTCCCCCTGACACATCATGTCACTCTGCAGCAACCATGCAGTCTGTTTATCCTCGCCACTTGGAGATTCCAACTTTTATTAACCCAAGGTCTATGGAGAAGGAGGCTAAAGCTGCTCAGTTGACTATCTTCTATGATGGGCAAGTTGTTGTGTTTGATGATTTTCCTGCTGATAAAGTGCAGGAGACGAAGATGGCTACTGCAGCAGGTGCAGTTGCCCTTTTGTACTACACATTGAATCGGAAATTGCAGACTCACGATGTAATTGATGAAGATGGTGAAGAAAATGGGAGTGATTCGCCAGCTGATACGCCATTAGGTATTGGCTGTGTTTCTCATCGGTTAATCCAAGCCCCTGCAACATGGTTGGAGACAATTTCTACATTGTTAGAAACTCTCAGGTTCACTTATTCGGAGACACTTGGGAAGTGGCCAATTAGGGATTTGGCGTTTGGTATCAACTTTCTTCTAAAGCGGCAGGGAAACTATCATGTGGGCAGTGAATTTTGTGGTAAGGACAGTGTACAGCTGAAAGGATCTGAAATTACTGCTGAACTTAAGTATCTCTTAAACTTGTTGACATTGTGTTGGCACTTTTCAAAGAAGCCCTTTCCCTTGTTTTTAGAAGAAACTGGCTACACTGAAGAAAACGTTCTCCTTCGAGAAGCAAAAGCAGGAATTTTGAAACCAACTTTTACAATAATAGCTGATCACAAGATGGGATGCCTTTTGTTATTGATTCGTGGCACGCATAATATCAAGGATACTTTAACAACTGTTACTGGAAATGTGGTACCATTTCATCACATTGTTGTTAATCTGGGGGGTGTCAGTGATTTGGTTTTAGGTTATGCACATTGTGGAATGGTTGCTGCTGCTCGATGGATTGCAAAGCTCGCAACTCCTTGTCTCCTTGAAGCACTTGGCCACTACCCTGACTATAAAGTTAAGATTGTAGGGCACTCTTTGGGTGGAGGAACTGCCGCAATTCTAACTTATGTGTTGAGAGAGAGAAAGGATCTGCCCGTAACCACGTGCATTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCAGGTGATAGTTTTATTACTTCTATTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGTTGCTTTTGTAGATGACTTGTGTTCTGAGGTTGTGATCCTTCGCATTGCGTATTGGAAAATGTTATTGTAG 2148 0.4372 MRAVEEKQWQNLEMMKQELKKSLKVELSHIASHQSAPIEAPEIQALLMRVSTKGSCAGPEGSRLLKELLNGDDDLMGLFVVVGPDKPPSKSIGEPNRLTSVAIDGPLGELVKKSYVVYTKPMELAWDGAKFGLPNATNVISKARTMHLHLHLNGLRLRSAFDMFLLGSFSPSQPSHTLVQEIIGKAPQSFLDGDDAYRNSRFKLIPYICKIDIDVGSSTVASGVPSLVLGYLNNLVVEMAFLVQNCLQPGTLWCPKTIPNSNSNDLSFQNNRREKTFKETTVDSISYRRQYLKEKGSFGDLTLGIALACTNGPPDTSCHSAATMQSVYPRHLEIPTFINPRSMEKEAKAAQLTIFYDGQVVVFDDFPADKVQETKMATAAGAVALLYYTLNRKLQTHDVIDEDGEENGSDSPADTPLGIGCVSHRLIQAPATWLETISTLLETLRFTYSETLGKWPIRDLAFGINFLLKRQGNYHVGSEFCGKDSVQLKGSEITAELKYLLNLLTLCWHFSKKPFPLFLEETGYTEENVLLREAKAGILKPTFTIIADHKMGCLLLLIRGTHNIKDTLTTVTGNVVPFHHIVVNLGGVSDLVLGYAHCGMVAAARWIAKLATPCLLEALGHYPDYKVKIVGHSLGGGTAAILTYVLRERKDLPVTTCITFAPAACMTWELAESGDSFITSIINGADLVPTFSVAFVDDLCSEVVILRIAYWKMLL 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00716 715 Pfam tify domain 347 373 IPR010399 -
Gma16g00716 715 Gene3D alpha/beta hydrolase 518 708 IPR029058 -
Gma16g00716 715 SUPERFAMILY alpha/beta-Hydrolases 515 693 IPR029058 -
Gma16g00716 715 ProSiteProfiles Tify domain profile. 345 380 IPR010399 -
Gma16g00716 715 Pfam Lipase (class 3) 556 693 IPR002921 GO:0006629
Gma16g00716 715 CDD Lipase_3 548 692 - -
Gma16g00716 715 SMART tify_2 345 381 IPR010399 -
Gma16g00716 715 Pfam Lipase 3 N-terminal region 422 500 IPR005592 GO:0016042
Gma16g00716 715 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 374 704 - -
Gma16g00716 715 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 374 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00716 Gma-Chr16 8833761 8842603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00716 385 704 Acyl Lipid Metabolism Gene Families AT3G14075 73.602 2.30e-154 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma16g00716 Lipase_3 6.5e-23 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00716 - - gmx:100788200 794.267