Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00692 ATGACCAGAGTTGAAGTTCCACTAAAGAGTGTTTCCACGTGGGTTTATGCCAGAGAAACAGAGGACAAAGAGTTCAGGAGCAAGCCCATCGTGCAGTACACGGAGGACCCGCGGCTCCACGCCGTCTTCGAGCAGTTCGGTGAGTCTGGGAGGTCCTTCAACTACTCCGAATCAATCTGCATCACATCGGAATCCATCCCCGAGCAGCAGATAATGGCTTACCTTGTCAAAATCCAGCGCGGCGGCTTCATCCAGCCCTTTGGCTCCATGATCGCCATCAACGAGCCCTCCTCATGCATCCTCGATTACTCTGACAACGCCCACGACATGCTCGACATTACTCTGCAGTCCGTCCCTTCGCTCGATGACAAGAACGACGTCGCCTTCGCTCTCGGCACCGATGTCCGAGCCCTCTTCACTCACTGCAGCGCTTTACTCCTCGAAAAGGCCTTCTCCGTTTTCGTTGCTAATCCTAATAAGCCTCGAGAAGTAAAAATTATTTTGTCGAAGAACCAGGAGAAGCTACTAGATTTGCTTCATAATCTGTCCCCAAGAAAAGAAAATTGTATTGGAAAGGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTGCCAAATGGTCAGCTGGTAGCGATTAAAACGCTGACACGTGGTACAAAAAACGAAACTATAGGTGACTTCTTATCAGAACTTGGTATAATGGCTCATGTAAACCACTCCAACACTGCCAAGTTAGTTGGCTATGGGGTGGAGGGAGTAATGTATCTAGTGCTTGAGTTGTCTGAAAAAGGGTGCTTAGCTTCAATGCTTAATGGTTCCAAGGACAAACTACCATGGTCTATTAGGCAGAAAATAGCATTAGGAACAGCTAAGGGTATAATCTTTACGTGGGCTGCCACATTGAAGGCAAGGGTCCTTAAGGAGGTTTGGAACATAGCAGCTGTGTTTCCTGTGGAGAAGAATTTGGCCGGTGGCGGCGGCGGCAATGATAATGGTAGCAATGGTAGCTCTAATAGTAGCTTCAGTGGTGAAATTGTACTAGAAGAAAATTTCTTGGGGATTTGTAGCAGAGAATTGCTAGCCAGAGGATGTGAACTTCTCAAGCGCACACGCACTGGTTTAGATCCAAACTGCCACACAAACGATGTGCTCCAGGCGGGGATAAACCTTGGCAAATAG 1176 0.4787 MTRVEVPLKSVSTWVYARETEDKEFRSKPIVQYTEDPRLHAVFEQFGESGRSFNYSESICITSESIPEQQIMAYLVKIQRGGFIQPFGSMIAINEPSSCILDYSDNAHDMLDITLQSVPSLDDKNDVAFALGTDVRALFTHCSALLLEKAFSVFVANPNKPREVKIILSKNQEKLLDLLHNLSPRKENCIGKGGYAEVYKGCLPNGQLVAIKTLTRGTKNETIGDFLSELGIMAHVNHSNTAKLVGYGVEGVMYLVLELSEKGCLASMLNGSKDKLPWSIRQKIALGTAKGIIFTWAATLKARVLKEVWNIAAVFPVEKNLAGGGGGNDNGSNGSSNSSFSGEIVLEENFLGICSRELLARGCELLKRTRTGLDPNCHTNDVLQAGINLGK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00692 391 SUPERFAMILY Protein kinase-like (PK-like) 187 293 IPR011009 -
Gma16g00692 391 ProSiteProfiles Protein kinase domain profile. 184 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00692 391 ProSitePatterns Protein kinases ATP-binding region signature. 190 212 IPR017441 GO:0005524
Gma16g00692 391 PANTHER OS08G0249100 PROTEIN 185 295 - -
Gma16g00692 391 Pfam Mo25-like 150 186 IPR013878 -
Gma16g00692 391 Pfam Protein tyrosine and serine/threonine kinase 188 294 IPR001245 GO:0004672|GO:0006468
Gma16g00692 391 Pfam PAS fold 73 165 IPR013654 GO:0006355
Gma16g00692 391 SUPERFAMILY PYP-like sensor domain (PAS domain) 78 181 IPR035965 -
Gma16g00692 391 PANTHER PROTEIN KINASE FAMILY PROTEIN 185 295 - -
Gma16g00692 391 Gene3D PAS domain 76 183 - -
Gma16g00692 391 Gene3D Transferase(Phosphotransferase) domain 1 184 305 - -
Gma16g00692 391 SMART tyrkin_6 184 359 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00692 Gma-Chr16 8338863 8344445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00692 18 151 Histidine Kinase Gene Family AT2G18790 58.088 1.33e-40 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma16g00692 PK_Tyr_Ser-Thr 1.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00692 - - gmx:100787372 208.764