Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00690 ATGAAATCATCCAAATTCTTCCCCAAAGTGGTTCGCATTTCGGTGACGGATCAAGATGCCACAGACTCCTCCAGTGATGAAGAGGCAGAACGTGTCAAAGTGAAGAAGATAGTGGTTAATGAAATTGTTTGTGTCAACAACAACAAAAAAAGACACAACAATGACAACAGTGGTTGTTGCTATTCAACCAAAGATAATGAAAGTCTCAaacaacaacgacagcaaagccttgtttcattaggtgaggagggctacatggaCAGCAAACAAAGTCTCAAACAACACAAGTTTCGCGGTGTGCGGCAGCGGCCTTGGGGCCGGTGGGCCGCCGAGATAAGAGACCCTTTGAGGCGAACGCGGGTTTGGCTTGGCACCTTCGACACTGCTGAGGAGGCTGCTATGGTTTACGACAAAGCCGCTATTAAATTCAGAGGCGCTGAAGCTGTCACCAATTTCATCAAACCGCCACTGAAAGATGATGCCGTGTCTCTTGAAATATGTGAGAGTGTTGTTAGCGGAACGAGTTGTGCATGTGATTCACCCACTTCAGTTCTCGTGTTTCAGCCTTGGATGGAACCACCATTGTTGGAAGAAACCTTCAAAGAAGTTTTTAGTGGGTTAACTGATGGTTATGATGATGGTTTCTTGTTTTCCAATGATTCACTTTGTGATCAACCTCTTCCTACGACGTTTTCTAACGCTGATTGCATTATTCCATTGGATGAAGATTTTGAGTCATGTAAATGGGTTGTGGATAATTATTTCAGTGATGATACTTCATTGCAATGA 789 0.4081 MKSSKFFPKVVRISVTDQDATDSSSDEEAERVKVKKIVVNEIVCVNNNKKRHNNDNSGCCYSTKDNESLKQQRQQSLVSLGEEGYMDSKQSLKQHKFRGVRQRPWGRWAAEIRDPLRRTRVWLGTFDTAEEAAMVYDKAAIKFRGAEAVTNFIKPPLKDDAVSLEICESVVSGTSCACDSPTSVLVFQPWMEPPLLEETFKEVFSGLTDGYDDGFLFSNDSLCDQPLPTTFSNADCIIPLDEDFESCKWVVDNYFSDDTSLQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00690 262 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 261 - -
Gma16g00690 262 SMART rav1_2 96 159 IPR001471 GO:0003700|GO:0006355
Gma16g00690 262 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Gma16g00690 262 PRINTS Ethylene responsive element binding protein signature 119 135 IPR001471 GO:0003700|GO:0006355
Gma16g00690 262 PANTHER - 6 261 - -
Gma16g00690 262 Pfam AP2 domain 96 145 IPR001471 GO:0003700|GO:0006355
Gma16g00690 262 SUPERFAMILY DNA-binding domain 96 152 IPR016177 GO:0003677
Gma16g00690 262 Gene3D AP2/ERF domain 95 154 IPR036955 GO:0003700|GO:0006355
Gma16g00690 262 CDD AP2 96 152 IPR001471 GO:0003700|GO:0006355
Gma16g00690 262 ProSiteProfiles AP2/ERF domain profile. 96 153 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00690 Gma-Chr16 8301446 8302389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00690 9 191 AP2-EREBP Transcription Factor Family AT4G27950 42.857 1.25e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma16g00690 AP2 1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00690 - - gmx:100779645 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00866 03 31195350 31196236 Gma16g00690 16 8301446 8302389 GST