Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00687 ATGGCAGAAGCGATGGTTGCTGGGGCATTTCTCTCAGCCTCCCTTCAAGTGACTTTTGACAGGCTGGCTTCAAGTGACATCAAAGATTACTTCCATGGAAGGAAACTCAAGGATGAGATGCTCAAAAAGCTAGATATTGTGCTGAATTCTATCAACCAAGTGTTGGAGGATGCAGAGGAAAGGCAGTACAGAAGCCCTAATGTGATGAAGTGGCTTGATGAGCTTAAAGAGGCTATATATGAAGCAGAGTTGCTGTTAGACGAGGTTGCTACGGAGGCGTCACGACAGAAGCTGGAAGCTGAATTTCAGCCTGCTACTAGCAAGGTGCGAGGCTTCTTCATGGCTTTTATTAATCCCTTTGACAAACAAATTGAATCTAGGGTCAAAGAATTACTAGAGAACATAGAATTTCTGGCTAAGCAAATGGATTTTTTAGGGTTGAGAAAGGGAATTTGTGCTGGCAATGAAGTTGGAATCAGTTGGAAACTCCCCAACAGATTGCCAACTACATCCTTGGTGGATGAATCTAGCATATGTGGTAGAGAGGGTGATAAAGAGGAAATAATGAAAATTTTACTTTCAGATAGTGTCACATGCAATCAGGTGCCAGTAGTTAGTATAGTGGGTATGGGAGGGATGGGTAAGACCACCCTTTCTCAGCTTGTATATAATGACCCGAGGGTTCTGGATCAATTTGACCTTAAAGCTTGGGTCTATGTTTCACAAGATTTTGATGTTGTTGCTCTTACAAAAGCGATTCTTAAGGCACTTCGGTCCTTAGCAGCAGAAGAAAAAGACTTGAATCTGCTCCAACTTGAATTGAAGCAAAGACTGATGGGAAAGAAATTTTTGCTTGTTTTAGATGATGTTTGGAACGAAAACTATTGGAGTTGGGAGGCACTACAAATTCCCTTCATTTATGGATCTTCAGGAAGTAGGATTCTTATTACCACTCGTAGTGAGAAGGTAGCATCGGTCATGAACTCCTCCCAAATACTTCATTTAAAGCCACTGGAGAAAGAAGATTGTTGGAAGCTATTTGTGAATCTTGCATTTCATGACAAGGATGCCTCCAAATATCCAAATCTTGTATCAGTTGGCAGTAAAATTGTTAACAAGTGTGGAGGATTGCCTTTAGCTATAAGAACAGTGGGAAATATCTTGCGAGCGAAATTCTCCCAGCATGAATGGGTTAAGATATTGGAAAGTGATATGTGGAACTTATCAGACAATGATAGCAGCATTAACCCCGCTCTGAGATTGAGTTACCATAATCTTCCTTCCTATCTGAAGCGTTGTTTTGCTTATTGCTCCTTATTTCCCAAAGGTTATGAGTTTTACAAGGATCAGTTAATCCAGTTGTGGATGGCAGAAGGTTTGTTGAATTTCTGCCAGATAAATAAGAGTGAAGAAGAGTTAGGTACTGAGTTCTTCAATGATCTAGTGGCAAGGTCTTTCTTCCAACAATCAAGACGCCATGGTTCTTGCTTCACTATGCATGATCTTCTTAATGACTTAGCAAAATCTGTCTCAGGAGATTTTTGTTTACAAATAGACAGCAGTTTTGACAAAGAGATAACAAAGAGAACTCGTCACATTTCATGCTCTCATAAATTTAACCTTGATGATAAATTTTTGGAGCATATTTCTAAGTGTAACAGACTGCATTGTCTTATGGCACTAACATGGGAAATTGGCAGAGGAGTTTTGATGAACAGCAATGACCAACGTGCTTTGTTTTCCAGAATAAAATATTTGCGCGTATTATCATTCAATAATTGTCTTCTCACAGAGTTAGTTGATGATATAAGCAATTTAAAGCTTTTACGTTATCTAGACCTTTCCTACACCAAGGTTAAAAGATTGCCTGACTCCATTTGTGTGCTGCATAATTTGCAGACACTATTATTAACATGGTGCTATCATTTGACAGAGCTCCCCTTAGATTTCCACAAACTTGTCAACTTGCGTAACCTTGATGTTCGTATGAGCGGAATAAATATGATGCCAAACCACATAGGAAACCTGAAACATCTTCAGACCCTGACTAGTTTTTTCATCAGGAAGCATAGTGGGTTTGATGTTAAGGAGTTGGGGAATCTCAACAATCTCCAAGGAACACTTTCAATTTTCAGGTTAGAAAATGTTACTGATCCTGCAGATGCCATGGAAGCTAATATGAAACAGAAAAAGCATTTAGAAGGATTAGTGTTGGATTGGGGTGACAAATTTGGAAGGCGCAATGAAAATGAGGACTCAATAATAGAAAGGAATGTGTTGGAGGCTCTTCAACCAAATGGTAACATGAAAAGGCTTACTGTTTTGCGTTATGATGGAACTAGCTTTCCAAGTTGGTTTGGAGGTACTCATTTACCCAATTTAGTATCTATTACCCTGACTGAAAGTAAATTCTGTTTTATCTTGCCACCGTTTGGGCAGCTCCCCTCTCTGAAGGAGCTTTACATATCATCCTTTTATGGGATAGAGGTCATTGGTCCTGAGTTTTGTGGTAATGATTCCTCAAATCTTCCATTCAGATCTCTTGAAGTTTTGAAATTTGAGGAAATGAGTGCATGGAAAGAATGGTGCAGTTTTGAAGGTGAAGGTTTGTCTTGTCTTAAAGATCTTTCTATAAAACGCTGTCCTTGGTTGAGAAGGACCCTGCCTCAACACCTTCCTTCTCTGAATAAATTGGTAATTTCTGATTGCCAACACTTAGAGGATTCAGTTCCCAAGGCTGCTAGCATTCATGAACTAGAGTTGCGTGGATGTGAAAAAATTTTGCTGAAAGATTTGCCATCCAGCTTGAAAAAGGCCAGAATTCATGGAACTCGCCTCATTGAGTCCTGCCTCGAGCAAATTCTGTTCAACAATGCCTTTCTGGAAGAACTGAAAATGCATGACTTCCGTGGTCCAAATCTAAAATGGTCCTCTTTGGATTTACAAACACATGATTCTCTTGGCACTCTATCTATAACAAGCTGGTATTCCTCCTCGTTCCCTTTTGCACTAGACTTGTTTGCCAATCTTCATTCTCTACATTTCTATGATTGTCCATGGCTTGAGTCATTTCCCAAAGGGGGTCTTCCTTCAACCCTGCAGAAACTCGAAATTGAGGGTTGCCCCAAGCTGGTTGCTTCTAGGGAGGACTGGGGATTCTTCAAACTCCATTCTCTCAAAGAGTTCAGAGTTAGTGATGAGCTTGCCAACGTGGTGTCTTTCCCAGAGTATCTGTTGCTACCATCCTCTCTCAGTGTGCTCGAGTTAATTGGATGTTCAAAGCTAACAACAACAAACTATATGGGTTTTCTCCACCTCAAATCTCTGAAGTCCTTCCATATTTCTGGTTGCCCTCGTCTCCAGTGCTTGCCAGAAGAGAGTCTCCCTAACTCTCTTTCTGTTCTGTGGATTCATGATTGCCCTTTACTTAAGCAGCGGTACCAAAAGAATGGAGAACATTGGCATAAAATTCACCACATCCCTTCAGTGATGATTACTTGGCAGATGAAACATGCA 3516 0.4039 MAEAMVAGAFLSASLQVTFDRLASSDIKDYFHGRKLKDEMLKKLDIVLNSINQVLEDAEERQYRSPNVMKWLDELKEAIYEAELLLDEVATEASRQKLEAEFQPATSKVRGFFMAFINPFDKQIESRVKELLENIEFLAKQMDFLGLRKGICAGNEVGISWKLPNRLPTTSLVDESSICGREGDKEEIMKILLSDSVTCNQVPVVSIVGMGGMGKTTLSQLVYNDPRVLDQFDLKAWVYVSQDFDVVALTKAILKALRSLAAEEKDLNLLQLELKQRLMGKKFLLVLDDVWNENYWSWEALQIPFIYGSSGSRILITTRSEKVASVMNSSQILHLKPLEKEDCWKLFVNLAFHDKDASKYPNLVSVGSKIVNKCGGLPLAIRTVGNILRAKFSQHEWVKILESDMWNLSDNDSSINPALRLSYHNLPSYLKRCFAYCSLFPKGYEFYKDQLIQLWMAEGLLNFCQINKSEEELGTEFFNDLVARSFFQQSRRHGSCFTMHDLLNDLAKSVSGDFCLQIDSSFDKEITKRTRHISCSHKFNLDDKFLEHISKCNRLHCLMALTWEIGRGVLMNSNDQRALFSRIKYLRVLSFNNCLLTELVDDISNLKLLRYLDLSYTKVKRLPDSICVLHNLQTLLLTWCYHLTELPLDFHKLVNLRNLDVRMSGINMMPNHIGNLKHLQTLTSFFIRKHSGFDVKELGNLNNLQGTLSIFRLENVTDPADAMEANMKQKKHLEGLVLDWGDKFGRRNENEDSIIERNVLEALQPNGNMKRLTVLRYDGTSFPSWFGGTHLPNLVSITLTESKFCFILPPFGQLPSLKELYISSFYGIEVIGPEFCGNDSSNLPFRSLEVLKFEEMSAWKEWCSFEGEGLSCLKDLSIKRCPWLRRTLPQHLPSLNKLVISDCQHLEDSVPKAASIHELELRGCEKILLKDLPSSLKKARIHGTRLIESCLEQILFNNAFLEELKMHDFRGPNLKWSSLDLQTHDSLGTLSITSWYSSSFPFALDLFANLHSLHFYDCPWLESFPKGGLPSTLQKLEIEGCPKLVASREDWGFFKLHSLKEFRVSDELANVVSFPEYLLLPSSLSVLELIGCSKLTTTNYMGFLHLKSLKSFHISGCPRLQCLPEESLPNSLSVLWIHDCPLLKQRYQKNGEHWHKIHHIPSVMITWQMKHA 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00687 1172 SUPERFAMILY L domain-like 498 910 - -
Gma16g00687 1172 Coils Coil 121 148 - -
Gma16g00687 1172 Gene3D Ribonuclease Inhibitor 542 950 IPR032675 -
Gma16g00687 1172 Coils Coil 41 61 - -
Gma16g00687 1172 Gene3D - 429 509 IPR036388 -
Gma16g00687 1172 Gene3D - 337 427 IPR042197 -
Gma16g00687 1172 PANTHER DISEASE RESISTANCE PROTEIN RP 17 900 IPR044974 GO:0006952
Gma16g00687 1172 Coils Coil 72 92 - -
Gma16g00687 1172 Pfam Rx N-terminal domain 10 102 IPR041118 -
Gma16g00687 1172 Gene3D Ribonuclease Inhibitor 951 1157 IPR032675 -
Gma16g00687 1172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 437 IPR027417 -
Gma16g00687 1172 PRINTS Disease resistance protein signature 890 906 - -
Gma16g00687 1172 PRINTS Disease resistance protein signature 277 291 - -
Gma16g00687 1172 PRINTS Disease resistance protein signature 374 388 - -
Gma16g00687 1172 PRINTS Disease resistance protein signature 204 219 - -
Gma16g00687 1172 Gene3D - 162 334 IPR027417 -
Gma16g00687 1172 PANTHER OS05G0414200 PROTEIN 17 900 - -
Gma16g00687 1172 Pfam NB-ARC domain 182 424 IPR002182 GO:0043531
Gma16g00687 1172 Gene3D - 15 129 - -
Gma16g00687 1172 SUPERFAMILY L domain-like 915 1158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00687 Gma-Chr16 8217133 8220648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00687 205 544 WRKY Transcription Factor Family AT5G45050 25.937 3.25e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00687 - - gmx:100777510 2363.19