Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00686 ATGGTTCTGCATAGCTGGATTTCCAGCTCTCATATTCTTGTTAATTTCTTGCTGCTGCTTGGTTGTGGCATAACCTACGGGACTGACACTGATATCTTCTGCTTGAAAAGTATCAAAGAATCCCTTGAAGACCCCTATAATTATTTGAAGTTCTCTTGGGATTTCAACAACAAAACTGAAGGGTATATCTGCAGGTTTAATGGGGTTGAGTGTTGGCACCCTGACGAGAACAGGGTCTTGAATCTCAAACTGTCGAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTCAAAATTGCTCGAGCTTAACTGGATTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGGAGACATATCCACTCTTATACCATTTGCGACGTCTATTGATCTATCTACAAATGAGTTTTCTGGGGCAATTCCCGTGAGTCTTGCGAATTGTACCTTTCTTAATACCCTTAAACTTGATCAGAATCGACTCACTGGCCAAATTCCTCCACAATTTGGTGTTCTCTCACGAATTAAGGTATTTTCTGTATCCAACAATCTTTTGACGGGGCAAGTTCCAATCTTTAGGGATGGGGTTGAGTTACATTATGCAAATAATCAAGGCCTATGTGGAGGAAATACATTGGCGCCTTGCCAAGCCACGCCTTCCAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCTGGCGGGGTGACTCTTGCGGCATTAGGATTGGGTATTGGAATGTTCTTCTTTGTGCGACGTGTTTCTTTCAAGAAGAAGGAAGAGGATCCTGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAACGAATTAAGGCAAGCTATATCGGTGCATTGCACAGAAAATATATGATTACACAGTTATTCATTTTTATTGTTTCTATGTTTGAGAAATCAATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGACAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGACGATGGCACAACTCTTATGGTTAAGAGATTACAGGAATCTCAGTACACTGAAAAAGAATTTATGTCTGAGATGGGTACGCTAGGTACTGTCAAACATCGCAATCTGGTTCCTCTTTTAGGTTTTTGTATGACCAAAAGGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAACCTCCATGACCAACTCCATCCCGCTGATGGTGTGAGCACCCTTGACTGGACTACAAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATCATCCACCGAAACATAAGCTCGAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTCGGCCTTGCTAGACTGATGAATCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGAGATTTAGGTTATGTTGCTCCTGAGTACACAAGAACTTTGGTTGCTACACCTAAAGGGGATATTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCAATGTGTCTAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTCACAAGCAATGCAAAACTCCATGATGCCATTGATGAATCACTAGTCAGAAAGGATGTTGATAGTGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTCTCACCAACTCCAAAGGAGAGGCCCACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATTTCACAACTGAGGATGATatattggtacctactgatattggtaatactgataACATGCAGGAACTTATTGTAGCCCAAGAAGGAAGTTATTGA 1905 0.4068 MVLHSWISSSHILVNFLLLLGCGITYGTDTDIFCLKSIKESLEDPYNYLKFSWDFNNKTEGYICRFNGVECWHPDENRVLNLKLSNMGLKGQFPRGIQNCSSLTGLDLSINKLSGTIPGDISTLIPFATSIDLSTNEFSGAIPVSLANCTFLNTLKLDQNRLTGQIPPQFGVLSRIKVFSVSNNLLTGQVPIFRDGVELHYANNQGLCGGNTLAPCQATPSKSNMAVIAGAAAGGVTLAALGLGIGMFFFVRRVSFKKKEEDPEGNKWARSLKGTKRIKASYIGALHRKYMITQLFIFIVSMFEKSISKMKLSDLMKATNNFSNTNIIGTGRTGTVYKAVLDDGTTLMVKRLQESQYTEKEFMSEMGTLGTVKHRNLVPLLGFCMTKRERLLVYKNMPNGNLHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDIYSFGTVLLELVTGERPTNVSKAPETFKGNLVEWITELTSNAKLHDAIDESLVRKDVDSELFQFLKVACNCVSPTPKERPTMFEVYQLLRAIGGRYNFTTEDDILVPTDIGNTDNMQELIVAQEGSY 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00686 634 Gene3D Ribonuclease Inhibitor 29 218 IPR032675 -
Gma16g00686 634 PANTHER LRR RECEPTOR-LIKE KINASE 3 611 - -
Gma16g00686 634 Gene3D Phosphorylase Kinase; domain 1 286 395 - -
Gma16g00686 634 PANTHER RECEPTOR-LIKE PROTEIN 55 3 611 - -
Gma16g00686 634 Gene3D Transferase(Phosphotransferase) domain 1 397 611 - -
Gma16g00686 634 ProSiteProfiles Protein kinase domain profile. 322 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00686 634 SUPERFAMILY Protein kinase-like (PK-like) 302 596 IPR011009 -
Gma16g00686 634 CDD STKc_IRAK 328 596 - -
Gma16g00686 634 SUPERFAMILY L domain-like 33 194 - -
Gma16g00686 634 Pfam Protein kinase domain 324 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00686 Gma-Chr16 8204767 8207064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00686 13 610 Receptor kinase-like Gene Family AT3G28450 44.959 7.54e-178 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gma16g00686 Pkinase 2.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00686 - - gmx:100305365 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00884 03 31612537 31613523 Gma16g00686 16 8204767 8207064 GST