Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00684 ATGGATAAGTTCAAACCGAACTACAATGCAGCTATGAGTTATAATGGTAAAACAACTTGTGGCAGAGCTCTTAGGGACCATTGTGGTGGAACCATTTTCACCTTCTTTGTTCGGATTGGCAATTCATCTATTAATCTTGCGGAGCTATGGGCAATTGTCTTTGCTCCTCCTTCCTTAGTTTTCTTCAGCTTGGTGGTTATGCAATGTCACCGCGAAGAAGCATCCAGCTGGCAAGATATTCCACTACATGATCAGTTTTCTTGTGCAAATGACTATGCCTTGAAGGTAAGGAAACCATATACTATCACAAAACAAAGAAAGAGGAGGACAGATAAAGAACATAAGAAGATCCTTGAAGCCTTAAAGCTATATGGCAGGGCCTGGCGACGAATTGAAGAAAGACAAGAAATTCAGATGAAGAAAGCCAAACTAATTGGTATGCTTGATGAGGTGGAGCAAAGGTACAGGCAGTACCAACAGCAGATGGAGATAGTGGTTTTATCGTTTGATGTTTGA 516 0.4109 MDKFKPNYNAAMSYNGKTTCGRALRDHCGGTIFTFFVRIGNSSINLAELWAIVFAPPSLVFFSLVVMQCHREEASSWQDIPLHDQFSCANDYALKVRKPYTITKQRKRRTDKEHKKILEALKLYGRAWRRIEERQEIQMKKAKLIGMLDEVEQRYRQYQQQMEIVVLSFDV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00684 171 Coils Coil 134 168 - -
Gma16g00684 171 PANTHER PROTEIN LHY 84 133 - -
Gma16g00684 171 Pfam Associated with HOX 111 170 IPR006563 -
Gma16g00684 171 PANTHER SWI/SNF COMPLEX-RELATED 84 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00684 Gma-Chr16 8191043 8194996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00684 133 170 Homeobox Transcription Factor Family AT2G35940 76.316 2.06e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00684 - - gmx:100785040 108.227