Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00682 ATGAAAAAATTTACCTCATCATGTGGCAAAATGTCAATCCTTTCtcttctctccttcttcttcttcttcttcttcttcttTCTCACCTATGCAAACTCTCAGTCTCAGTACTCTTTGTTGTATGATCAAGAACATGCAGTCCTATTGAAGATAAAGCAATACCTGCAAAATCCACCATTCCTCAATCACTGGACCTCATCAAACTCCTCACATTGCACTTGGCCAGAGATCAGCTGCACTAATGGTTCAGTCACTTCACTGTCTATGATCAACACCAACATCACTCAAACACTGCCACCTTTCCTTTGTGACCTCACAAACCTCACACATGTTGATTTTCAGTGGAATTTCATTCCTGGTGAGTTCCTAAAATCTCTCTACAAATGCTCCAAGCTTGAGTACCTTGACCTCTCACAGAATTACTTTGTTGGCAAGATTCCTGATGATATTGACAACTTGGCTAACCTGAGTTTTCTTAGCCTTAGTGGCAACAACTTCTCTGGTGATATTCCAACCAGCATTGGGAGGTTAAAGGAACTAAGAAATCTTCAACTTTATCAGTGTCTTCTCAATGGTACTTTCCCTGCTGAAATTGGCAATTTGTCCAACCTTGAGTCCTTGTATGTGTTCTCAAACCACATGCTCCCTCCCACAAAGTTGCCATCAAGCTTGACCCAGTTGAACAAATTGAAGGTCTTTCATATGTATGAGTCCAACTTGGTAGGGGAAATCCCTGAAACCATTGGACACATGGTGGCATTGGAGAAATTGGATTTGTCAAAAAATGGTTTAAGTGGACAAATTCCTAATGGTTTGTTCATGCTGAAAAATCTGAGCATACTATATCTTTACCGGAACAGCCTTTCCGGGGAGATACCTAGAGTGGTTGAAGCATTCAACTTGACAGAACTTGATCTTTCAGAGAATATACTTAGTGGGAAAATACCTGATGATTTGGGAAGGCTCAATAACTTAAAATACTTGAATTTATATAGCAATCAGTTATTTGGGAATGTACCAGAAAGCATTGCTCGTCTGCCAGCTCTGACGGACTTTGTTGTTTTTCTCAACAATTTATCAGGTACTCTTCCTCTAGACTTCATTGCATCTAATAGTTTCACAGGAAGGTTGCCAGAGAACTTGTGCTACCATGGAAGTTTAGTAGGTTTAACTGCTTATGACAATAACCTGAGTGGGAAGTTGCCTGAATCTCTAGGAAGTTGCAGTAGCCTGAATATTCTAAGGGTTGAAAACAATAATCTTTCTGGTAATGTTCCTAGTGGTCTATGGACATCGATGAACTTGGAAAGATTTATGATAAATGAAAACAAGTTCACTGGTCAGCTTCCTGAAAGATTGTCTTGGAATGTTTCAGTCATTAACAACCTCTTCAATGGTAGTATTCCACTGGAGCTAACATCTCTTCTCCATCTAACAACTCTTCTGCTTGATCATAACCAGCTCACAGGGTCACTTCCATCAGATATAATATCATGGAAGTCGCTAATAACTCTAGATTTGAGCCACAATCAACTCTCTGGAGTACTCCCAGATGTAATTGCTCAGTTACCTGGCCTTAATATTTTGGATTTGTCAGAAAACAAAATCTCTGGTCAAATTCCACTTCAACTAGCCCTTAAGAGACTCACAAATCTCAATCTGTCCTCCAATCTTTTGACAGGGAGGATTCCAAGTGAATTAGAAAACCTTGCTTATGCCAGAAGCTTCTTGAACAATTCCGGTCTCTGTGCTGATAGTAAAGTACTAAACCTTACCTTGTGCAATTCTAAGCCTCAAAGGGCAAGAATTGAAAGAAGATCTGCATCTTATGCTATAATCATAAGTTTGGTGGTAGGAGCCTCCTTACTGGCTTTGTTGTCATCATTCTTGATGATCAGAGTTTACAGAAAAAGAAAGCAGGAAATGAAAAGGTCATGGAAGCTCACTTCCTTTCAGAGGCTGAGTTTCACAAAAACAAATATTGCGTCCTCAATGTCAGAACACAATATTATTGGCAGTGGTGGGTATGGTGCAGTATATCGTGTCGTTGTTGATGATTTAAATTATGTTGCGGTGAAAAAGATATGGAGTAGCAGAAAATTAGAGGAGAAGCTTGCAAATTCATTTCTTGCAGAAGTTGAAATATTGAGCAATATTCGTCATAACAACATTGTAAAGTTGCTATGCTGCATTTCCAATGAGGATTCTCTGCTCCTTGTCTATGAGTAG 2229 0.3876 MKKFTSSCGKMSILSLLSFFFFFFFFFLTYANSQSQYSLLYDQEHAVLLKIKQYLQNPPFLNHWTSSNSSHCTWPEISCTNGSVTSLSMINTNITQTLPPFLCDLTNLTHVDFQWNFIPGEFLKSLYKCSKLEYLDLSQNYFVGKIPDDIDNLANLSFLSLSGNNFSGDIPTSIGRLKELRNLQLYQCLLNGTFPAEIGNLSNLESLYVFSNHMLPPTKLPSSLTQLNKLKVFHMYESNLVGEIPETIGHMVALEKLDLSKNGLSGQIPNGLFMLKNLSILYLYRNSLSGEIPRVVEAFNLTELDLSENILSGKIPDDLGRLNNLKYLNLYSNQLFGNVPESIARLPALTDFVVFLNNLSGTLPLDFIASNSFTGRLPENLCYHGSLVGLTAYDNNLSGKLPESLGSCSSLNILRVENNNLSGNVPSGLWTSMNLERFMINENKFTGQLPERLSWNVSVINNLFNGSIPLELTSLLHLTTLLLDHNQLTGSLPSDIISWKSLITLDLSHNQLSGVLPDVIAQLPGLNILDLSENKISGQIPLQLALKRLTNLNLSSNLLTGRIPSELENLAYARSFLNNSGLCADSKVLNLTLCNSKPQRARIERRSASYAIIISLVVGASLLALLSSFLMIRVYRKRKQEMKRSWKLTSFQRLSFTKTNIASSMSEHNIIGSGGYGAVYRVVVDDLNYVAVKKIWSSRKLEEKLANSFLAEVEILSNIRHNNIVKLLCCISNEDSLLLVYE 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00682 742 SMART LRR_typ_2 546 570 IPR003591 -
Gma16g00682 742 SMART LRR_typ_2 201 227 IPR003591 -
Gma16g00682 742 SMART LRR_typ_2 251 275 IPR003591 -
Gma16g00682 742 SMART LRR_typ_2 500 522 IPR003591 -
Gma16g00682 742 SMART LRR_typ_2 475 499 IPR003591 -
Gma16g00682 742 SMART LRR_typ_2 322 346 IPR003591 -
Gma16g00682 742 SMART LRR_typ_2 153 177 IPR003591 -
Gma16g00682 742 Gene3D Ribonuclease Inhibitor 369 594 IPR032675 -
Gma16g00682 742 Gene3D Ribonuclease Inhibitor 90 217 IPR032675 -
Gma16g00682 742 Gene3D Ribonuclease Inhibitor 32 89 IPR032675 -
Gma16g00682 742 Gene3D Ribonuclease Inhibitor 218 368 IPR032675 -
Gma16g00682 742 Gene3D Phosphorylase Kinase; domain 1 635 742 - -
Gma16g00682 742 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 461 742 - -
Gma16g00682 742 Pfam Leucine Rich Repeat 324 344 IPR001611 GO:0005515
Gma16g00682 742 Pfam Leucine Rich Repeat 131 153 IPR001611 GO:0005515
Gma16g00682 742 Pfam Leucine Rich Repeat 300 321 IPR001611 GO:0005515
Gma16g00682 742 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 18 460 - -
Gma16g00682 742 ProSitePatterns Protein kinases ATP-binding region signature. 671 694 IPR017441 GO:0005524
Gma16g00682 742 PRINTS Leucine-rich repeat signature 502 515 - -
Gma16g00682 742 PRINTS Leucine-rich repeat signature 523 536 - -
Gma16g00682 742 Pfam Leucine rich repeat N-terminal domain 43 79 IPR013210 -
Gma16g00682 742 SUPERFAMILY Protein kinase-like (PK-like) 650 742 IPR011009 -
Gma16g00682 742 SUPERFAMILY L domain-like 49 365 - -
Gma16g00682 742 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 18 460 - -
Gma16g00682 742 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 461 742 - -
Gma16g00682 742 ProSiteProfiles Protein kinase domain profile. 665 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00682 742 Pfam Protein kinase domain 667 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00682 742 SUPERFAMILY L domain-like 299 564 - -
Gma16g00682 742 Pfam Leucine rich repeat 477 536 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00682 Gma-Chr16 8146820 8149159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00682 35 742 Receptor kinase-like Gene Family AT5G25930 46.862 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma16g00682 Pkinase 6.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00682 - - gmx:100776454 1356.66