Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00641 ATGGAGAGGTACAAGTTAATTAAGGAAGTAGGTGATGGAACATTTGGGAGTGTTTGGAGAGCCATTAATAAGCAAAGTGGTGAAGTTGTTGCAATCAAGAAAATGAAAAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGGAAAATGAATCATGCAAATATTGTGAAGCTGAAGGAAGTTATACGAGAATGTGACACTCTGTGCCTTGTTTTTGAGTACATGGAATACAACCTGTACCAACTTATGAAAAACAGGGAAAAGCTGTTTTCTGAAAATGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTTTAGCTTACATGCACCAGCGTGGATACTTTCATCGTGATCTTAAGCCTGAAAACTTGCTGGTCACCAAAGATGTCATCAAGATTGCTGATTTTGGCCTAGCCAGAGAGATCAGTTCACTACCACCCTATACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTCCTGCTTCAGTCCCATCTATATAGCTCTAAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAGTGAAGCAGATGAGATTTACAAAATATGCAGTGTGCTAGGTAGTCCAACCACTGAATCTTGGGCAGATGGACTCAAACTTGCCAGGGATATCAACTATCAGTTTCCACAGCTTGCTGGTGTACATCTCTCTACACTGATCCCATCCAGAAGCGATGATGCAATCAGCCTTGTGACGTCACTTTGTTCATGGGATCCCTGCAAGAGACCAACTGCAGCAGAGGTTCTTCAACATCCTTTTTTTCAGAGTTGCTTTTACATCCCTCCATCCCTTCGCACCAGAGCTGTAACCAGAACTCCACCATCTGCTGGGACCAGGGGATCACTGGATCGGCTGGGCCTCAAGAGATACTCTGGTGCTTTGCCTAATACAAAAATCACCAACAATTTTACTTCCCCAAAAGTACAAGCTTCTATAGCTTCAGGTGATATAGTTGGGTTTCAGCCATCTGATGGAATTAAGAGCAAGAAATCATTGAAGACTACTCAACAATCAAAATATCGATTACCAGGAAAAGGCAGCCCAACTTCTATAAACAAGGGGAGGACTGCACGTGGGGTTTCAGAAACAGCTGAGAAGTTGGTCAATATGTCAATCGGTACTCGAAGACTGTCCTTGGGACAAACCCGTCCGCCTCCCATGAAGGCTGGAGTCAATTGGATTTCTGAATCTGGAAACTTGCTCAGGTCCGGACAACAAATTCCAACTGAAAGAACTTTGACAAGAAAAGTTGCCGGTGTGCTAATACGAAGCTTCTAA 1365 0.4337 MERYKLIKEVGDGTFGSVWRAINKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHANIVKLKEVIRECDTLCLVFEYMEYNLYQLMKNREKLFSENEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDVIKIADFGLAREISSLPPYTEYVSTRWYRAPEVLLQSHLYSSKVDMWAMGAIMAELFTLRPLFPGSSEADEIYKICSVLGSPTTESWADGLKLARDINYQFPQLAGVHLSTLIPSRSDDAISLVTSLCSWDPCKRPTAAEVLQHPFFQSCFYIPPSLRTRAVTRTPPSAGTRGSLDRLGLKRYSGALPNTKITNNFTSPKVQASIASGDIVGFQPSDGIKSKKSLKTTQQSKYRLPGKGSPTSINKGRTARGVSETAEKLVNMSIGTRRLSLGQTRPPPMKAGVNWISESGNLLRSGQQIPTERTLTRKVAGVLIRSF 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00641 454 MobiDBLite consensus disorder prediction 357 390 - -
Gma16g00641 454 CDD STKc_MAK_like 4 283 - -
Gma16g00641 454 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Gma16g00641 454 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00641 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Gma16g00641 454 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Gma16g00641 454 Gene3D Transferase(Phosphotransferase) domain 1 84 289 - -
Gma16g00641 454 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 402 - -
Gma16g00641 454 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00641 454 MobiDBLite consensus disorder prediction 357 386 - -
Gma16g00641 454 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00641 454 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 402 - -
Gma16g00641 454 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00641 Gma-Chr16 7481661 7488116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00641 1 290 Core Cell Cycle Gene Families AT3G48750 36.700 1.73e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Gma16g00641 Pkinase 2.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00641 K08829 - gmx:100819558 874.389