Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00615 ATGGGGACATCGAAGCATCCATCCAACGTGGCCAAAGATGACCCAAAAGTGGTGCATGCAATTCAACCACGTGTGCGTAACTTGAATGGAAAAAATCCAGAGTCTCGGTTTGAAGGCTTCTCCCTCACCGCCATTGCCTTTGCCACTGTGATCGCCAAAATTCAACACCTGTCATCCATTTCTAGTACAGTTCATTTTGACCTTAAATTCCTTGTTATGGTTGCAGTGGAGAACTATGGCTTCATGTTTTGCATAGTAGCTGTACAAGTGAAGATCATGGCCTCATCTAGCTACTCTAACTCTCCCTGTGCTGCCTGCAAGTTCCTGAGAAGGAAATGCATGCCGGATTGCATTTTCGCGCCATATTTCCCACCAGAAGAGCCTCAGAAATTCGCCAATGTGCACAAGATATTCGGTGCAAGCAACGTGAGCAAGCTTCTGAATGAGGTGCAGCCTCATCAGAGAGAGGATGCAGTGAATTCTCTGGCCTATGAAGCCGAGGCAAGGATAAAGGATCCAGTTTATGGGTGTGTTGGGGCAATCTCAGTGCTCCAAAGGCAAGTGATTAGGCTCCAGAAGGAACTTGATGCCACAAGTGCTGATTTGATTCGTTATACTTGCAATGAAATGCCAACTACTACTCAAGATGGTAGAAGGATTATTGGTGAAGGGGGTGGTTCTTCTCTTGGTCAATCTTCTGGTTACTATTACCCTTCTCCTTGGAACAATGATACACTTGGAGATGGTTATCACAGAGGTGACAATATATAA 771 0.454 MGTSKHPSNVAKDDPKVVHAIQPRVRNLNGKNPESRFEGFSLTAIAFATVIAKIQHLSSISSTVHFDLKFLVMVAVENYGFMFCIVAVQVKIMASSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATSADLIRYTCNEMPTTTQDGRRIIGEGGGSSLGQSSGYYYPSPWNNDTLGDGYHRGDNI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00615 256 ProSiteProfiles LOB domain profile. 101 202 IPR004883 -
Gma16g00615 256 Pfam Lateral organ boundaries (LOB) domain 102 198 IPR004883 -
Gma16g00615 256 Coils Coil 181 201 - -
Gma16g00615 256 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 93 246 - -
Gma16g00615 256 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 93 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00615 Gma-Chr16 7193708 7205654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00615 85 219 AS2 family AT3G27650 74.265 9.65e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma16g00615 LOB 3.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00615 - - gmx:100800167 311.612