Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00601 ATGGCTAGGAGTTGGCTTATTGACATTGGAGGATTTGCAAAGAAAGTGAAAAGCATTACTCTATCTTCAGCTGATCAAATCAAGGATTGTGGGGCATATCGTGAATGTCCAAACTGTTCTTATCATATTGATAACAGTGATGTTTCTACTGAGTGGCCTGGGTTTCCTCTTGGTGTAAAGTTTGATCCTTCTGATGTAGAACTCTTAGAACATTTAGCAGCAAAATGTGGCATTGGAAACACTAAGCAACACTTGTTTATCAATGAGTTCATCCCAACACTGGAAGGAGACCAAGGTATTTGCTACACACATCCGGAAAATCTTCCAGGTGCTAAGAAAGATGGGAATTATGTCCATTTCTTTCACAGAACAACCAATGCATATGCTACTGGTCAACGAAAGCGTCGAAAGATTCATCATCAACAGGGTTTGACTGAAGAGCATGTGCGCTGGCATAAGACTGGCAAGACAAAAGCTATAATAGAAGATGGAGTACATAAGGGCTTTAAGAAGATCATGGTTATTTACATAAGATCTAGTGAGAATGGGTCCAAGCCCTATAAATCCAACTGGGTAATGCATCAGTACCATCTAGGGACTGAAGAAGATGAGAAAGAAGCTGAATATGTGGTTTCAAAAGTTTTTTATCAACAGCAAAAGCAGACTGAGAAAAATGAGGACAATCCAATGGCTGGAGATCCTGCCAATATAATATCACGAACAAGTCCAAGAACTCCAAAACCAAATCCCCCCAATCCGCCTCGTACGGGAAAATCTGTTGATTGTGATGATAACATTGATGAAACTGTACTTCTGTCTGCTGCCCTGGATACCAAGACAATCCCTGAAGGATCACTTGCCCCACAATCTGATATTCAGGATCAAGACAATACTGGTGATGCTGCATGGTTAGCCGGCGAATCACAGGCTGAGGAAAACTCTGAATATGATGGCTTGGACGACATCTTATTGTGCAACGAGATCTTAGATTCTTCTGCTCTGTTGAATGACTCTGGATTGGACTACACCAATCTCGATGACATTGCAAGCTATGCTACACAAAGGGCTAGAAATGATAATGAACCTTGCGGAATTTCTCTCCTGGATACACTGGAATTGGATACTCCAGATTTTGATCTTTCTAGTTTATATTTTTGTTCTCAAGACAGTAGTATTCTTGACTGGATGGACAGCCATGAAAATGATTACTTCTTTGGTGGTAAAATCCGAAATGGTGTAGTTGATTCTGAACTATATGTACTAGATATCAAGATGTGGTGA 1281 0.4044 MARSWLIDIGGFAKKVKSITLSSADQIKDCGAYRECPNCSYHIDNSDVSTEWPGFPLGVKFDPSDVELLEHLAAKCGIGNTKQHLFINEFIPTLEGDQGICYTHPENLPGAKKDGNYVHFFHRTTNAYATGQRKRRKIHHQQGLTEEHVRWHKTGKTKAIIEDGVHKGFKKIMVIYIRSSENGSKPYKSNWVMHQYHLGTEEDEKEAEYVVSKVFYQQQKQTEKNEDNPMAGDPANIISRTSPRTPKPNPPNPPRTGKSVDCDDNIDETVLLSAALDTKTIPEGSLAPQSDIQDQDNTGDAAWLAGESQAEENSEYDGLDDILLCNEILDSSALLNDSGLDYTNLDDIASYATQRARNDNEPCGISLLDTLELDTPDFDLSSLYFCSQDSSILDWMDSHENDYFFGGKIRNGVVDSELYVLDIKMW 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00601 426 SUPERFAMILY NAC domain 39 217 IPR036093 GO:0003677|GO:0006355
Gma16g00601 426 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 1 398 - -
Gma16g00601 426 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 398 IPR044799 GO:0003700
Gma16g00601 426 Pfam No apical meristem (NAM) protein 56 198 IPR003441 GO:0003677|GO:0006355
Gma16g00601 426 ProSiteProfiles NAC domain profile. 55 217 IPR003441 GO:0003677|GO:0006355
Gma16g00601 426 Gene3D NAC domain 64 222 IPR036093 GO:0003677|GO:0006355
Gma16g00601 426 MobiDBLite consensus disorder prediction 220 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00601 Gma-Chr16 6944915 6950608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00601 33 219 NAC Transcription Factor Family AT4G28500 52.910 1.85e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma16g00601 NAM 7.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00601 - - gmx:100794879 809.675