Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00570 ATGAACAAGATTCCCACAATGGTGAAGCACTTGGTGAAAGAGGGCATGCCCCTAAGTTTGGGGACATCAACATCCTTGAATTCCACCGTGGCGGAATTCTCAGCTGATCCTGGCTTTGCTGAGAGGGCTGCAAAGCTTTCTTGCTTTGGAAGTAGGAGTTTCAATGGCAGGACCACCCAATTGTGCCTCAACATTGCTGAATTGGCTCAGAGATCTTCTCCATTGGTGGAAAATGGGAAGAAGCAGCTCCCTATAGTCTCAAGTAGTCCATCACTCAAAGTGTTTGGATCTCAAATGGGTACTCAGGAGAACAACAATTCTCCATTGCAAGACCTAATGGAAGTGGCCAATTCTCAAGAGGAGTCTGCAATCTCTGAACAAACACCTAATGGAGACACTGGGGAGAAACCTTCCCCTTATGTGAATTCTAGGAAAAGAAAAGGAAAATCCAAAGAAACTTTAACCTCTACCAACCCCCCTATGGCTGCTGAAGCTAACGAAGACTCCAATGCAAAGCGCAACAAGCCTAACAAAGGTGAGGGGAATGAAAATGGCCAAGTGAAGGCAGAGGAAGAGTCCAAAGGTTGTAATAATGGTAATGCAAATGATGAGAAACAGAGCAAGAGTAACTCAAAACTTCCTGAGCCTCCAAAGGATTGCATTCATGTTAGAGCAAGAAGAGGTCAAGCCACCGATTTTCGTAGTCTTGCAGAAAGAGGCAAGTCAACAATTCCACAACAAGTTACAACATTCCAACTTCAGTATACCCTTAATACTAACTTCTTCAACACCAAAGAACAAAAGGCAAAGAACACCAAGGAGCATAAACGCCTGTCCTCAACCTGGACTAATGGATTTGCTTATTGCAATACCATGTCAATGGTTTCAGGGCACGACAACTCTGAAAAGGGAAACACTGTGGCTAGTGTGATGGCGCGACAAGACACGACGCCGGACGTGCGACAATGTACTACGCCCTTCGGCCGAGGTCACGGGGATGCGACGGAGATGCAGGCAAATGGCAGAGGTCACGACGAGGTCACAACAGATCGAAATGTCAGACAAACGAGGAAGCGGGAGCTCGAGCGTGAGGTAGGAGTGTTCATGAATTAG 1113 0.4645 MNKIPTMVKHLVKEGMPLSLGTSTSLNSTVAEFSADPGFAERAAKLSCFGSRSFNGRTTQLCLNIAELAQRSSPLVENGKKQLPIVSSSPSLKVFGSQMGTQENNNSPLQDLMEVANSQEESAISEQTPNGDTGEKPSPYVNSRKRKGKSKETLTSTNPPMAAEANEDSNAKRNKPNKGEGNENGQVKAEEESKGCNNGNANDEKQSKSNSKLPEPPKDCIHVRARRGQATDFRSLAERGKSTIPQQVTTFQLQYTLNTNFFNTKEQKAKNTKEHKRLSSTWTNGFAYCNTMSMVSGHDNSEKGNTVASVMARQDTTPDVRQCTTPFGRGHGDATEMQANGRGHDEVTTDRNVRQTRKRELEREVGVFMN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00570 370 MobiDBLite consensus disorder prediction 327 355 - -
Gma16g00570 370 MobiDBLite consensus disorder prediction 168 190 - -
Gma16g00570 370 MobiDBLite consensus disorder prediction 191 207 - -
Gma16g00570 370 MobiDBLite consensus disorder prediction 116 137 - -
Gma16g00570 370 MobiDBLite consensus disorder prediction 338 355 - -
Gma16g00570 370 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 7 239 IPR024097 GO:0006355
Gma16g00570 370 PANTHER BHLH TRANSCRIPTION FACTOR 7 239 - -
Gma16g00570 370 MobiDBLite consensus disorder prediction 116 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00570 Gma-Chr16 6595061 6596587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00570 30 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 40.807 1.90e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00570 - - gmx:100812081 419.468