Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00544 ATGAGCAGAACCAGCGATGCGGCCGCTTATCCCAAGGGATTCGAAGAGGCCACCATCGGATCTATCCTCAAGGGGACTCTCAAGGTGTTGGAGTATCTCCACCGACACGGCCACATTCACCGCGATGTCAAGGCTGAGAATATTCTCCTCGATGATAACGACAAGGTCAAGCTCGCTAACTTCGGCGTCTTCGCTTGCATGTTCGACACCGGcgaccgctag 222 0.518 MSRTSDAAAYPKGFEEATIGSILKGTLKVLEYLHRHGHIHRDVKAENILLDDNDKVKLANFGVFACMFDTGDR 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00544 73 Pfam Protein kinase domain 12 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00544 73 Gene3D Transferase(Phosphotransferase) domain 1 7 73 - -
Gma16g00544 73 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1-LIKE ISOFORM X1 9 73 - -
Gma16g00544 73 ProSiteProfiles Protein kinase domain profile. 1 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00544 73 SUPERFAMILY Protein kinase-like (PK-like) 11 66 IPR011009 -
Gma16g00544 73 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00544 Gma-Chr16 6014026 6014327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00544 8 73 MAP Kinase Kinase Kinase Kinase AT4G10730 72.727 2.43e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gma16g00544 Pkinase 4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00544 - - gmx:100783699 119.012