Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00533 ATGCTCAGAGTTGGTTCGATGAGATACTTTTACCTCTATCTTGTGGTTCTTACTTGGTTTTTGTCCATCCCCAGTACTCATGAACTACAACTTGCTCAGACCCAAGTTCTGTTACAGTTAAGAAAGTATCTGGAGTACCCTACCTCTCTGCAAATGTGGGAAAATTACAATGTAGACCTTTGTAGCCTTCCTCCATCTGCACATGTGAGCCTCAAGTGTGAGGGTAATTCAGTAACTGAGCTTAAAATTATGGGAGATAGAGCTGTGAAGGTTGACAAGTTCAATGGACATGCAGTTCCCAATCAGACACTGTCACTGAGCTTCTCTATTGATTCTTTTGTCACCACATTGACAAGGCTAACAAACTTAAGGGTCCTTAGATTGGTGTCCTTGGGGATTTGGGGGCCACTTCCTGATAAAATTCATAGGCTTTCTTTGCTTGAAGTTTTGGATATGAGCTTAAACTTCTTATATGGTTCAGTGCCACCAAAAATGTCTGCAATGGTCAAGCTTCATACTCTGACACTAGATGGCAATTATTTCAACAGCACAATGCCTGATTGGTTTGATTCTTTGTCTAATCTAAGTGTCTTGAGTTTGAAGAGTAACCACTTAAAGGGTTCATTCCCTTCTACACTATGCAAAATTAGGAGTCTTGTTGATATTTCCTTGTCCCACAATGAGTTGTCTGGTGGATTGCCTGATCTCGCTGCTCTCTCTGGCCTACATGTACTTGATTTAAGGGAAAATCATTTAGATTCTGAACTGCCACTCATGCCTAAAGCAGTGGTCACAATTCTGCTTAGCAAAAATTCTTTTTCGGGTGAGATACCAAATCACTTTAGTGAATTGAGTCATCTTCAGCATCTAGATCTTTCATCAAATCATCTCAGTAAGATGCCCCCATCTTCCTTGTTCTCTTTGCCAAACATTAGCTATTTGAATTTAGCCAGTAATGAGCTAAGTGGATCCCTTCCACAGAAACTAAACTGTGGCAGCAAACTTGGGTTTGTGGATATCTCTAGTAACAAGTTAAATGGTGGACTTCCTTCTTGCTTGGCCAATACATCGGGTAAAAGAGTTGTTAAATATGGTGGAAACTGTTTAGCTGTTGATTCTCAACCTCAGCGGCGAGGGACTTATTGTAAAGTATCAAGCTCGGGAAGGAAAAACTTCTGGAAATGGAAAATAGCTGCAGCAGTTGCCATGATTATTGTAATTGTTCTTGTACTTTCTGCTTTTGGAGTTTTCTTTTATAGAAAATATCGTTCAAGGAAGATCTATAGGCATCAGATGTTGTCTAAGGCTGTTCAAGATAACTCAATAACAGGAGTTTCTTCTGAAGTCCTTGCCAGTGCTAGATTCATTTCTCAAGCAGCGAAGCTAGGGACACAAGCTACTCCAATACGTAGACAATTTTCAATTGAAGAGTTGAAAGAAGTCACAAGAAACTTTGATTTGTCAACTTATATTGGTGAAGGCTCCTTAGGAAAGCTGTACAAAGGTAAACTAGAGAATGGAACCTATGTGGTGATAAGACGTGTGGCTCTGTCAAAGAAATGCTCAATACAAAATCTTAAAGCTGGGTTGGATTTACTCTCAAAGCTTCACCATCCAAATTTGGTTAGCCTTTTTGGTCATTGTATTGATGGTGATGGACAAGATGATTCCAGTGGCCTCAAACTTCATCTTGTATATGAGTATGTGCCGAATGGGAAATATGGTACCCATTTGTCAGAATTTTCATCAGACAAGGCACTGAAGTGGTCTGATAGATTAGCAATTTTAATCGGAGTTGCCAAAGCTGTGCACTTTTTACATACCGGAGTTATACCGGGTTGTTTTAGAAACCAATTAAAGACAAACAATATTTTACTTGATGAGCATCACATTCCCAAACTAAGTGACTATGGTATGTCCATCATTGCTGAGGAGATCGAATACCTTGAGGCAAAGGGAGAAAATCTAAAATCATGCCAAAGAGCAAAATTAGAAGATGATGTCTATAATTTCGGGTTGATACTGTTTGAATCTCTTGTTGGACCCATAGCAAGCGAGAAAGGAGAGAAATATTTTCTTGATGAAAAGACATCCTTTGACAGTCAAGATGGCAGAATTAAAATAGTGGATCCTGTAGTGTTGACCACTTGCTGTCCAGAGTCATTATCAATTGCAATATCCATCACAACCAAATGCATATCCCGTGAATCCTCACCTCCTCCTTCTTTTGAGGATGTCTTATGGAACTTACAGTATGCAGCTCAAGTCCAAGCCACAGCAGATGCAGAACAAAAACCAGATTCTACATCCTAA 2313 0.396 MLRVGSMRYFYLYLVVLTWFLSIPSTHELQLAQTQVLLQLRKYLEYPTSLQMWENYNVDLCSLPPSAHVSLKCEGNSVTELKIMGDRAVKVDKFNGHAVPNQTLSLSFSIDSFVTTLTRLTNLRVLRLVSLGIWGPLPDKIHRLSLLEVLDMSLNFLYGSVPPKMSAMVKLHTLTLDGNYFNSTMPDWFDSLSNLSVLSLKSNHLKGSFPSTLCKIRSLVDISLSHNELSGGLPDLAALSGLHVLDLRENHLDSELPLMPKAVVTILLSKNSFSGEIPNHFSELSHLQHLDLSSNHLSKMPPSSLFSLPNISYLNLASNELSGSLPQKLNCGSKLGFVDISSNKLNGGLPSCLANTSGKRVVKYGGNCLAVDSQPQRRGTYCKVSSSGRKNFWKWKIAAAVAMIIVIVLVLSAFGVFFYRKYRSRKIYRHQMLSKAVQDNSITGVSSEVLASARFISQAAKLGTQATPIRRQFSIEELKEVTRNFDLSTYIGEGSLGKLYKGKLENGTYVVIRRVALSKKCSIQNLKAGLDLLSKLHHPNLVSLFGHCIDGDGQDDSSGLKLHLVYEYVPNGKYGTHLSEFSSDKALKWSDRLAILIGVAKAVHFLHTGVIPGCFRNQLKTNNILLDEHHIPKLSDYGMSIIAEEIEYLEAKGENLKSCQRAKLEDDVYNFGLILFESLVGPIASEKGEKYFLDEKTSFDSQDGRIKIVDPVVLTTCCPESLSIAISITTKCISRESSPPPSFEDVLWNLQYAAQVQATADAEQKPDSTS 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00533 770 SUPERFAMILY Protein kinase-like (PK-like) 468 750 IPR011009 -
Gma16g00533 770 Gene3D Transferase(Phosphotransferase) domain 1 570 769 - -
Gma16g00533 770 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
Gma16g00533 770 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Gma16g00533 770 Pfam Leucine rich repeat 265 321 IPR001611 GO:0005515
Gma16g00533 770 SMART LRR_typ_2 239 262 IPR003591 -
Gma16g00533 770 SMART LRR_typ_2 168 191 IPR003591 -
Gma16g00533 770 SMART LRR_typ_2 284 307 IPR003591 -
Gma16g00533 770 SMART LRR_typ_2 192 215 IPR003591 -
Gma16g00533 770 SMART LRR_typ_2 308 332 IPR003591 -
Gma16g00533 770 Gene3D Phosphorylase Kinase; domain 1 447 568 - -
Gma16g00533 770 PANTHER OS07G0166700 PROTEIN 10 769 IPR045272 GO:0004714|GO:0006468
Gma16g00533 770 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 10 769 - -
Gma16g00533 770 Gene3D Ribonuclease Inhibitor 31 261 IPR032675 -
Gma16g00533 770 Gene3D Ribonuclease Inhibitor 262 387 IPR032675 -
Gma16g00533 770 SUPERFAMILY L domain-like 36 371 - -
Gma16g00533 770 Pfam Protein tyrosine and serine/threonine kinase 487 677 IPR001245 GO:0004672|GO:0006468
Gma16g00533 770 ProSiteProfiles Protein kinase domain profile. 485 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00533 Gma-Chr16 5896559 5901054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00533 12 695 Miscellaneous Gene Families AT5G14210 58.069 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gma16g00533 PK_Tyr_Ser-Thr 3.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00533 - - gmx:100784640 1491.86