Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00529 ATGTGCAATGGAGAAATTTCATCTCCTGCATATATGCATGACATGTTAAAGAGAGACCCCAATTCCTCATCCTCACATGCACAAGTAGATGCAAATAAAGGCAGGTTTGAAGCCCTAGGAGCCTCTAAAAGCAGCTTTGGTTTTTTTCCTTGGCTCTTTGTCCCCTCATTGGGCAAAGACGTGCTAAGTTATGAGACAACTTCACCTGATTCCTCTGGCAGTGGCAGCTACTACCATTGCATTGAAAATGTTTCACAGAACCAGTGTGAGACATTTGCACTCTTTTTCGCAAACTCTTACTACTCTCTCTCCAACCTCACCTTTTATTTGGGACTAAACAAGTTTGTGATTGCACAAGCAAATGGTTTCTCTGCAGACACTGAGTTCTTCTCCCAGGACCAGCCTCTTCTTATACCTATTCATTGCAAATGCATAGGTGGTGGCTTCTCTCAGGCTGAGTTAACCAAAACCACCATCAAAGGAGAGAGCTTCTATGGCATTGCTCAATCACTAGAGGGTTTGCCAACTTGCAAGGCTATTAGGGACAACAACCCTGGTGTGTCACCTTGGAATCTTGATGACAAAGTGAGATTAGTTGTTCCATTGAGATGTTCCTGTCCATTTTCATCTCAAGTTAGACCACAACCAAAGCTTCTTCTTTCTTATCCTGTAAGTGAAGGTCCTTTGGTTAAGCCCAAGGAACCCAATACTGGCTTTCAAACAACTAGCATCCCAGTGACAACAAGTCCACACAAGAAGTCACCAATGTGGAAGACTGAATTGTGCATTGGTCTAGCTGGTGTTGCACTTGGAGTCTGCATTGCTTTTGCTGCATTCTTTTTCTTCATCAGATTGAAGCACAAGAAGGAGGAAGAGAATTCATGCAAGGAAGGGGACTTGGAGCTGCAATATCTGAACCAAAGTGTGAGAACCACCTCAACTAGTGACAAGAAGATTTCATTTGAAGGGTCTCAGGATGCTCTTGATGTGAAAATTGTGGACACCGACGCCGCCACGCCGCGGAGGAAGTTGTTGCTGGATACATACACCATTGAGGATGTGAGAAAAGCAACTGAAGATTTCAGCTCAAGCAATCACATTGAAGGGTCAGTGTATCACGGTCGTCTGAATGGAAAGAACATGGCAATCAAAAGGACAAAGGCAGAAGTAGTAGTGTCAAAGATAGATCTTGGCCTTTTCCATGATGCAATTCACCACCACCCAAACATACTTAGGCTTCTTGGAACTAGCATGTTAGAGGGGGAGCAGCAAGAAGAGTCATTTTTGGTTTTTGAGTATGCCAAAAATGGTTCATTGAAAGATTGGCTCCATGGTGGACTAGCCATCAAGAACCAATTCATTGCTTCCTGCTACTGTTTCCTGACTTGGAGCCAAAGGCTCAGGATTTGCCTTGATGTGGCCAGTGCCTTGCAGTATATGCACCATGTTATGAATCCAAGTTATGTGCATAGAAATGTAAAGAGCCGGAACATCTTTTTGGATGAAGAATTTGGTGCCAAGATAAGGAATTTTGGTATGGCTGGTTGTGTTGAGAATGACACTGAGGACCCTCAATTCTATTCCACTAACCCTGCCTCTTGGAGTCTTGGTTATTTGGCACCTGAATATGTGCACCAAGGTGTAATTTCCCCAAGTGTTGATATCTTTGCTTATGGGGTGGTTTTGTTGGAAGTTTTGTCTGGTCAAACACCTATAAGCAGGCCTAATGAGAAGGGAGAAGGATGCATTTGGCTTACAGATAAAATCAGGTCCATTTTGGTGTCTGAAAATGTGAATGAACTAAGGGATTGGATAGACAATGCATTAGGGGAGAACTATTCATTTGATGCAGCTGTGACACTTGCCAACATTGCAAGAGCTTGTGTGGAGGAAGACTCTTCTTTGAGACCAAGTGCAAGGGAAATTGTTGAGAAGATATCAAGATTGGTGGAGGAATTACCACAAGGGGAACATGACGTGTTAATGTGTGAAAGCTCTAGCAAACCTCTGGTCATGGCAGTGGGAAACAATCTTGAATAA 2040 0.4333 MCNGEISSPAYMHDMLKRDPNSSSSHAQVDANKGRFEALGASKSSFGFFPWLFVPSLGKDVLSYETTSPDSSGSGSYYHCIENVSQNQCETFALFFANSYYSLSNLTFYLGLNKFVIAQANGFSADTEFFSQDQPLLIPIHCKCIGGGFSQAELTKTTIKGESFYGIAQSLEGLPTCKAIRDNNPGVSPWNLDDKVRLVVPLRCSCPFSSQVRPQPKLLLSYPVSEGPLVKPKEPNTGFQTTSIPVTTSPHKKSPMWKTELCIGLAGVALGVCIAFAAFFFFIRLKHKKEEENSCKEGDLELQYLNQSVRTTSTSDKKISFEGSQDALDVKIVDTDAATPRRKLLLDTYTIEDVRKATEDFSSSNHIEGSVYHGRLNGKNMAIKRTKAEVVVSKIDLGLFHDAIHHHPNILRLLGTSMLEGEQQEESFLVFEYAKNGSLKDWLHGGLAIKNQFIASCYCFLTWSQRLRICLDVASALQYMHHVMNPSYVHRNVKSRNIFLDEEFGAKIRNFGMAGCVENDTEDPQFYSTNPASWSLGYLAPEYVHQGVISPSVDIFAYGVVLLEVLSGQTPISRPNEKGEGCIWLTDKIRSILVSENVNELRDWIDNALGENYSFDAAVTLANIARACVEEDSSLRPSAREIVEKISRLVEELPQGEHDVLMCESSSKPLVMAVGNNLE 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00529 679 SUPERFAMILY Protein kinase-like (PK-like) 347 644 IPR011009 -
Gma16g00529 679 ProSiteProfiles Protein kinase domain profile. 357 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00529 679 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 45 228 - -
Gma16g00529 679 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 227 674 - -
Gma16g00529 679 PANTHER PROTEIN LYK2 45 228 - -
Gma16g00529 679 PANTHER PROTEIN LYK2 227 674 - -
Gma16g00529 679 MobiDBLite consensus disorder prediction 235 251 - -
Gma16g00529 679 Gene3D Phosphorylase Kinase; domain 1 333 433 - -
Gma16g00529 679 Gene3D Transferase(Phosphotransferase) domain 1 434 664 - -
Gma16g00529 679 MobiDBLite consensus disorder prediction 231 251 - -
Gma16g00529 679 Pfam Protein kinase domain 369 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00529 Gma-Chr16 5859696 5862257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00529 78 671 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 39.319 1.97e-130 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma16g00529 Pkinase 1.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00529 - - gmx:100816082 1129.01