Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00475 ATGGAGAATCATGATAACCTTGCAGAGAAAGAGAATTCGGCTACTAACATAACCGAAGAGACGCTACCTTCTTCTCCTTCGATCACCGATCATGAAGAAGCTGATCCCAAACCTGATGATGATCATGGTGCTGAAGCCACCGCCCAAGCTGAACCATCGTCTCCAAAGAAAGATGAGGAGGAGGCAGAGGCAGAGAAGAAAGAAGAAACCGCGTCTCCTCCGCCAAGCCTTGAGAAAGTTTCAGAAGAGATTGACCTGTTTCTCGTGACTCTGCCGAAGAAAAACGACGATGAAAATGCTGCGGAGAAGAATTTTGAGATTCCTGGCTTTTTTGAGAGATACACGGATCTGGTGGAGAAGAAGATAGCCAAATATGATGCGGAAGGGAAGGCGAAATGGGGAGAGGTGGCGGAGGAAGATTCGTGGTTGCTTGAAACCGCGAATCGGGTTTCGAAGCTGATGATGTTGCTGAATCATCATCATCATCATCTTGTTGAACCGGAGGAGGAGGAGAAAGAGAACGACGGTGGAAATGGAAAAGGAAAAGGAAAAGACTCGCTGGTGAATCGCGTTGCATCGATTCACCAGCGTGTGATGTCGTATTTGGAGGAGGACTTCAGATTTCTGATGGAAGAATGTAGAATCCCAATCGAATTAGATCCAGGAGGCAATAATAATAACAATGACACCAAAGGGAAACAACAACAACAACAACAGGTTTCATCATCGGAACAAGAAGAGGTGAAGAAAGACCAAGAAGGCGAAATCGACGAAAGTTTCCCGGGTTACTCTGAGGAGACAATTGCCAGCTTGAGCAAGATCGCCGGCGAGATGTTACCCGGCGGCTACGAATCGGAGTGCTGCCAGGTGTACATCATCTCGCGGAGGAACGCGTTCGAGGAGGTTCGCAAGAAGCTAGGGCTGGAGAGGATCAGCATCGACGACATGGTTCTGAAGGTGCAGTGGGAAACTCTCGCCGCGAACATGATCCCTGCCTGGATCAACACTCTCAAGCAGTGCGCGGCGGTGTACTTCCCCGGCGAGCGAAGGCTCGCCGAGGCCGTGTTTGCCAGCAGCCCCTCCGTCTCGGCGGGGCTCTTCGGTAGCCTCTCCCGCGGAGTTGTGATCCAGCTCCTCAACTTTGCGGAGGGCGCCGCCATGACCAAGCGCGCCGCCGAGAAGCTCTTCAAGCTCCTCGACATGTACGAGAGCCTCCGGGAGGTCATCCCAAAAGTCAACGGACTATTCCCGGATGAGTCCGTGGAGGAACTGAAGACGGAGATGAATGTCGCCAAGTCGCGACTAGGCGAGGCCGCCATCTTCATCTTCAGTGACCTAGAAAACCAGATCAAACTGGAGACCGCGAAAAGCGCGGTCCCCGGCGGAGCAGTGCACCCCCTCACACGCTACATAATGAACTACCTGAGCGTAGCGGGAGACTACAAAGAAACCCTAGAACAAGTCTTCAAAGACCATTCCAAGATCGAACGTGCAGACTCCACCAGCAGGCCGCACAGCGAAAACGACGGCGTTCCGGAGAAGCAAGCATCGTCACCGTTCGCAGGGCAGGTTCTCCGAGTCATGGACTTGCTAGACTCAAGCCTAGAAGGTAAAGGGCGTTTATACAAAGACGTTGCACTGAGCAATTTCTTCATGATGAACAACGGAAGGTACATTCTGCAGAAGATAAAAGGATCAAGCGAGATGAGCCAGGTGATGGGTGACACGTGGATAAGGAAGAAATCTTCTGAACTTAGAACATACCACAAGAACTACCAGAGAGAAACGTGGAACAGGGTGCTACAGTTTCTGAACCCGGAAGGGTTGAACGTGAACGGGAAGGTGCACAAGCCGGTGCTGAAGGAGAGGTTCAAGAGCTTCAATGCGTTGTTCGATGAGATTCACAGGACGCAGAGCTCGTGGGTGGTGAAGGACGAGCAACTTCAGTCGGAGCTTAGGGTTTCGATCTCGGGAGTGGTGGTTCCGGCCTACAGGGCCTTCATTGGGAGGTTTGCGCAGATCTTTGACCCAGGAAGACAGACTGAGAAGTACATAAAGTACCAACCTGAAGATATTGAGACCTACATTGATGAGTTGTTTGAAGGGAAACCTCACCAGTCCATTGCTAGAAGGAGAACATAA 2142 0.5135 MENHDNLAEKENSATNITEETLPSSPSITDHEEADPKPDDDHGAEATAQAEPSSPKKDEEEAEAEKKEETASPPPSLEKVSEEIDLFLVTLPKKNDDENAAEKNFEIPGFFERYTDLVEKKIAKYDAEGKAKWGEVAEEDSWLLETANRVSKLMMLLNHHHHHLVEPEEEEKENDGGNGKGKGKDSLVNRVASIHQRVMSYLEEDFRFLMEECRIPIELDPGGNNNNNDTKGKQQQQQQVSSSEQEEVKKDQEGEIDESFPGYSEETIASLSKIAGEMLPGGYESECCQVYIISRRNAFEEVRKKLGLERISIDDMVLKVQWETLAANMIPAWINTLKQCAAVYFPGERRLAEAVFASSPSVSAGLFGSLSRGVVIQLLNFAEGAAMTKRAAEKLFKLLDMYESLREVIPKVNGLFPDESVEELKTEMNVAKSRLGEAAIFIFSDLENQIKLETAKSAVPGGAVHPLTRYIMNYLSVAGDYKETLEQVFKDHSKIERADSTSRPHSENDGVPEKQASSPFAGQVLRVMDLLDSSLEGKGRLYKDVALSNFFMMNNGRYILQKIKGSSEMSQVMGDTWIRKKSSELRTYHKNYQRETWNRVLQFLNPEGLNVNGKVHKPVLKERFKSFNALFDEIHRTQSSWVVKDEQLQSELRVSISGVVVPAYRAFIGRFAQIFDPGRQTEKYIKYQPEDIETYIDELFEGKPHQSIARRRT 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00475 713 Pfam Exo70 exocyst complex subunit 332 698 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma16g00475 713 MobiDBLite consensus disorder prediction 494 510 - -
Gma16g00475 713 ProSiteProfiles Protein kinase domain profile. 356 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g00475 713 MobiDBLite consensus disorder prediction 163 186 - -
Gma16g00475 713 MobiDBLite consensus disorder prediction 1 80 - -
Gma16g00475 713 MobiDBLite consensus disorder prediction 10 28 - -
Gma16g00475 713 Gene3D Exocyst complex component Exo70 171 710 - -
Gma16g00475 713 PANTHER EXOCYST COMPLEX PROTEIN EXO70 62 709 IPR004140 GO:0000145|GO:0006887
Gma16g00475 713 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 62 709 - -
Gma16g00475 713 SUPERFAMILY Cullin repeat-like 145 701 IPR016159 -
Gma16g00475 713 MobiDBLite consensus disorder prediction 494 516 - -
Gma16g00475 713 MobiDBLite consensus disorder prediction 221 243 - -
Gma16g00475 713 MobiDBLite consensus disorder prediction 30 73 - -
Gma16g00475 713 MobiDBLite consensus disorder prediction 219 262 - -
Gma16g00475 713 MobiDBLite consensus disorder prediction 163 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00475 Gma-Chr16 5142506 5144647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00475 68 713 EXO70 exocyst subunit family AT5G13990 48.939 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00475 K07195 - gmx:100807802 1295.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00475 16 5142506 5144647 Gma02g00584 02 5842372 5844501 PCT
Gma02g00584 02 5842372 5844501 Gma16g00475 16 5142506 5144647 PCT