Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00465 ATGGCAGACCCAACAGCTATTTACGAGTTTTTCAAGCAGCAGCCCTCAAACGGTGGTGGAAAGAGAGCACCACCACCGTCCTCCGCCGGCGGCACCACACGCACCTTCCAATGCCACTTCTGCCACCGCAAGTTCTACACCTCCCAAGCCCTCGGCGGCCACCAGAACGCCCACAAGCTCGAGCGCGCCGCCGCGAGAAGATCCTCCGCCAACGCCAACCTCAACCTCAACGTCGTCCCCCCTGCTGCTACTAACGGGCCCATGCCCATGCTGGAGCCCACCGAGCTCTTTTTTCACCACCACCCTCCTTACTGGCTCGATGTGGAGCCCTTGCAGCACTTTCATCATCACCACACTACTGCACCTCTTTCTTCCTTCCACGCTGCTGCGTCTTCCGTTTCCGCACCTCAACAACAACAACTTCTTCTCTCCGCCGGACACAACAACGTCGTCGACGTCGCTGCTTCTTCCGACCACGTCAACCTCGACCTCACCCTCCGCTTGTGA 507 0.5937 MADPTAIYEFFKQQPSNGGGKRAPPPSSAGGTTRTFQCHFCHRKFYTSQALGGHQNAHKLERAAARRSSANANLNLNVVPPAATNGPMPMLEPTELFFHHHPPYWLDVEPLQHFHHHHTTAPLSSFHAAASSVSAPQQQQLLLSAGHNNVVDVAASSDHVNLDLTLRL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00465 168 Gene3D Classic Zinc Finger 26 78 - -
Gma16g00465 168 SUPERFAMILY beta-beta-alpha zinc fingers 33 63 IPR036236 -
Gma16g00465 168 PANTHER ZINC FINGER PROTEIN JAGGED 24 168 IPR045320 GO:0003700
Gma16g00465 168 ProSiteProfiles Zinc finger C2H2 type domain profile. 36 63 IPR013087 -
Gma16g00465 168 ProSitePatterns Zinc finger C2H2 type domain signature. 38 58 IPR013087 -
Gma16g00465 168 MobiDBLite consensus disorder prediction 11 32 - -
Gma16g00465 168 PANTHER OS02G0182300 PROTEIN 24 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00465 Gma-Chr16 5013991 5014497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00465 34 105 C2H2 Transcription Factor Family AT5G14010 51.389 2.01e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00465 - - gmx:102661833 318.161