Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00453 ATGGCGAGCAGGTACTGGGCAGTGTCTCTTCCCGTCCCCAACTCCGCATCTCAGCTCTGGAACCAATTCCAGGAACGAATCTCCAAGCATTCCTTCGACACTCCTCTCTACAGATTCAACATCCCCAACCTCCGCATCGGAACCCTAGACTCTCTCCTCTCCCTCAGCGATGACCTCGCCAAGTCCAACAATTTCGTGGAAGGAGTTACGCACAAGATCAGGCGCCAGATTGAGGAGCTCGAGAGAGTTTCCGGCATCGACACCGGCGCCCTCACCGTCGACGGCGTCCCCGTCGATTCCTACTTGACCAGGTTTGTTTGGGATGAGGCAAAGTACCCGACCATGTCGCCTTTGAAGGAGATTGTGGATGGTATTCACAGTCAAGTGGCAAAGATTGAGGATGATCTCAAGGTTCGTGTTTCTGAGTATAACAATATCCGCAGTCAGCTTAATGCTATCAACCGAAAGCAAACTGGAAGCTTAGCAGTCCGTGATCTTTCCAACTTGGTAAAACCTGAGGACATTGTAACTTCAGAAAATTTAACTACCCTCCTTGCAATTGTTTCCAAGTATTCACAGAAGGATTGGCTCTCAAGCTATGAAACATTGATAAATTATGTGGTCCCCAGGTCTTCTAAGAAGTTGTATGAGGATAACGAATATGCTCTTTATACTGTAACACTCTTCAGTCGTGTTGCGGATAATTTTAGAACTAGTGCACGTGAAAAAGGGTTCCAAATTCGTGACTTTGAATACAGTCCAGAAACACATGAGAACCGAAAGCAGGAGTTAGATAAATTGGTACAAGATCAGGAAAGATTGAGGGCTTCTCTGTTGCAATGGTGCTATACCAGCTATGGAGAGGTTTTCAGTTCCTGGATGCACTTTTGTGCTGTGCGTTTATTTGCTGAGAGCATTCTGAGATATGGTCTGCCACCATCTTTCTTGGCATGTGTTTTAGCTCCTTCTGTAAAATCCGAGAAGAAAGTACGTTCTATCCTTGAAGGGTTGACTGATAGCACAAACAGTGCATACTGGAAGACCGAGGATGAAGTAGGTGCCGGGATGGCTGGCCTAGCAGGTGATGCCGATGCTCACCCCTATGTGTCTTTCACCATCAATGTTGCTTGA 1131 0.4677 MASRYWAVSLPVPNSASQLWNQFQERISKHSFDTPLYRFNIPNLRIGTLDSLLSLSDDLAKSNNFVEGVTHKIRRQIEELERVSGIDTGALTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHSQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIVTSENLTTLLAIVSKYSQKDWLSSYETLINYVVPRSSKKLYEDNEYALYTVTLFSRVADNFRTSAREKGFQIRDFEYSPETHENRKQELDKLVQDQERLRASLLQWCYTSYGEVFSSWMHFCAVRLFAESILRYGLPPSFLACVLAPSVKSEKKVRSILEGLTDSTNSAYWKTEDEVGAGMAGLAGDADAHPYVSFTINVA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00453 376 Gene3D - 163 251 - -
Gma16g00453 376 SUPERFAMILY Vacuolar ATP synthase subunit C 2 375 IPR036132 GO:0015078|GO:0033180|GO:1902600
Gma16g00453 376 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 376 IPR004907 GO:0033180|GO:0046961|GO:1902600
Gma16g00453 376 Gene3D Vacuolar atp synthase subunit c; domain 1 17 334 - -
Gma16g00453 376 CDD V-ATPase_C 5 373 IPR004907 GO:0033180|GO:0046961|GO:1902600
Gma16g00453 376 Gene3D - 41 312 - -
Gma16g00453 376 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 376 - -
Gma16g00453 376 Pfam V-ATPase subunit C 5 369 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00453 Gma-Chr16 4869942 4874883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00453 1 376 Primary Pumps ATPases(2) AT1G12840 82.447 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00453 K02148 - gmx:100780187 731.865